Yanyan Ping

IMOP-Cancer: identifying mutation order pairs impacting cancer phenotypes

Dissecting cellular states of infiltrating microenvironment cells in melanoma by integrating single-cell and bulk transcriptome analysis

Identifying the driver miRNAs with somatic copy number alterations driving dysregulated ceRNA networks in cancers

Functional regulations between genetic alteration-driven genes and drug target genes acting as prognostic biomarkers in breast cancer

Revealing the contribution of somatic gene mutations to shaping tumor immune microenvironment

The Heterogeneous Cellular States of Glioblastoma Stem Cells Revealed by Single-Cell Analysis

Systematic investigation of the prognostic impact of clonal status of somatic mutations across multiple cancer types

Single-Cell Transcriptomic Analysis Reveals a Tumor-Reactive T Cell Signature Associated With Clinical Outcome and Immunotherapy Response In Melanoma

Dynamic regulatory networks of T cell trajectory dissect transcriptional control of T cell state transition

Identifying Key Somatic Copy Number Alterations Driving Dysregulation of Cancer Hallmarks in Lower-Grade Glioma

Dissecting the Invasion-Associated Long Non-coding RNAs Using Single-Cell RNA-Seq Data of Glioblastoma

Prognostic impact of a lymphocyte activation-associated gene signature in GBM based on transcriptome analysis

Transcriptomic heterogeneity of driver gene mutations reveals novel mutual exclusivity and improves exploration of functional associations

Dissecting the Functional Mechanisms of Somatic Copy-Number Alterations Based on Dysregulated ceRNA Networks across Cancers

Prioritizing Gene Cascading Paths to Model Colorectal Cancer Through Engineered Organoids

Revealing the subtyping of non‐small cell lung cancer based on genomic evolutionary patterns by multi‐region sequencing

Prognostic Impact of a Lymphocyte Activation-Associated Gene Signature in GBM based on Transcriptome Analysis

Discovering Rare Genes Contributing to Cancer Stemness and Invasive Potential by GBM Single-Cell Transcriptional Analysis

CellMarker: a manually curated resource of cell markers in human and mouse

Oncogenic long noncoding RNA landscape in breast cancer

Identifying mutual exclusivity across cancer genomes: computational approaches to discover genetic interaction and reveal tumor vulnerability

LncNetP, a systematical lncRNA prioritization approach based on ceRNA and disease phenotype association assumptions

Systemically identifying and prioritizing risk lncRNAs through integration of pan-cancer phenotype associations

A comprehensive overview of lncRNA annotation resources

Cooperative genomic alteration network reveals molecular classification across 12 major cancer types

Identifying the crosstalk of dysfunctional pathways mediated by lncRNAs in breast cancer subtypes

Identifying core gene modules in glioblastoma based on multilayer factor-mediated dysfunctional regulatory networks through integrating multi-dimensional genomic data

Chromatin states modify network motifs contributing to cell-specific functions

The DNA Methylome and Transcriptome of Different Brain Regions in Schizophrenia and Bipolar Disorder

Prioritizing candidate disease miRNAs by integrating phenotype associations of multiple diseases with matched miRNA and mRNA expression profiles