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Yu Xia

McGill University · CA
Area of research
Molecular Biology · Materials Chemistry
Research interest
Research interests include Bioinformatics and Genomic Networks, Protein Structure and Dynamics, Microbial Metabolic Engineering and Bioproduction, and RNA and protein synthesis mechanisms.
h-index
48
citations
14,775
works
249
NIH funding
primary concept
Biology
email

Recent publications

Relationship between perturbation specificity and functional dispensability in yeast phosphoproteome
Biophysical Journal 2026cited by 0position: contributordoi
Divergent landscapes of positive and negative selection signatures across residue-resolved human-virus protein-protein interaction interfaces
2026cited by 0position: contributordoi
Mutation-induced biophysical destabilization as a key contributor to cancer-driving potential in the human structural protein interactome
2026cited by 0position: contributordoi
PD-L1 positive platelets mediate resistance to immune checkpoint inhibitors in patients with colorectal cancer
Cell Communication and Signaling 2025cited by 13position: middledoi
A quantitative comparison of the deleteriousness of missense and nonsense mutations using the structurally resolved human protein interactome.
2025cited by 1position: contributordoi
Soybean Seed Classification and Identification Based on Corner Point Multi-Feature Segmentation and Improved MobileViT
AgriEngineering 2025cited by 1position: firstdoi
The Impact of Disorder-Order Switching on Protein Sequence Evolution.
2025cited by 0position: contributordoi
The relationship between interfacial overlap and functional divergence in the yeast protein-protein interaction network.
2025cited by 0position: contributordoi
Virus targeting as a dominant driver of interfacial evolution in the structurally resolved human-virus protein-protein interaction network.
2025cited by 0position: contributordoi
SSRAAI: Learning Sequence and Structural Representations to Predict Antibody-Antigen Interactions.
2025cited by 0position: contributordoi
FiGS-MoD: Feature-informed Gibbs Sampling Motif Discovery Algorithm for Mapping Human Signaling Networks
2025cited by 0position: contributordoi
Cross-species single-cell RNA-seq analysis reveals disparate and conserved cardiac and extracardiac inflammatory responses upon heart injury
Communications Biology 2024cited by 10position: middledoi
Predicting depression risk in early adolescence via multimodal brain imaging.
2024cited by 2position: contributordoi
Structure-guided Evolutionary Analysis of Interactome Network Rewiring at Single Residue Resolution in Yeasts.
2024cited by 0position: contributordoi
Neutrophil extracellular traps induced by the hypoxic microenvironment in gastric cancer augment tumour growth
Cell Communication and Signaling 2023cited by 88position: middledoi
Comparative Transcriptomic Analyses of a Vero Cell Line in Suspension versus Adherent Culture Conditions.
2023cited by 10position: contributordoi
SSCAE: A Neuromorphic SNN Autoencoder for sc-RNA-seq Dimensionality Reduction
2023cited by 0position: lastdoi
SSCAE: A Neuromorphic SNN Autoencoder for sc-RNA-seq Dimensionality Reduction
2023cited by 0position: lastdoi
Activation of a transient progenitor state in the epicardium is required for zebrafish heart regeneration
Nature Communications 2022cited by 51position: firstdoi
LincRNA‐EPS impairs host antiviral immunity by antagonizing viral RNA–PKR interaction
EMBO Reports 2022cited by 13position: middledoi
Are transient protein-protein interactions more dispensable?
2022cited by 11position: contributordoi
From functional genomics of vero cells to CRISPR-based genomic deletion for improved viral production rates.
2022cited by 3position: contributordoi
Structural Determinants of Yeast Protein-Protein Interaction Interface Evolution at the Residue Level.
2022cited by 1position: contributordoi
Additional file 9 of Molecular landscape of IDH-mutant astrocytoma and oligodendroglioma grade 2 indicate tumor purity as an underlying genomic factor
Figshare 2022cited by 0position: middledoi
Calycosin Alleviates Sepsis-Induced Acute Lung Injury via the Inhibition of Mitochondrial ROS-Mediated Inflammasome Activation
Frontiers in Pharmacology 2021cited by 35position: firstdoi
Principal component analysis of alpha-helix deformations in transmembrane proteins
PLoS ONE 2021cited by 20position: lastdoi
Quantifying evolutionary importance of protein sites: A Tale of two measures.
2021cited by 15position: contributordoi
Haplotype-resolved de novo assembly of the Vero cell line genome.
2021cited by 15position: contributordoi
Principal component analysis of alpha-helix deformations in transmembrane proteins.
2021cited by 11position: contributordoi
Structural Profiling of Bacterial Effectors Reveals Enrichment of Host-Interacting Domains and Motifs.
2021cited by 8position: contributordoi

Grants

No grants ingested yet.

Frequent collaborators

· 17 papers (2019–2026)Avital Sharir-Ivry · McGill University3 papers (2019–2021)Amirali Amirsoleimani · York University2 papers (2023–2023)Friederike Dündar · Cornell University2 papers (2022–2024) · 2 papers (2023–2023)Miaoyan Qiu · Cornell University2 papers (2022–2024)Zhuoxin Cheng · Harbin Medical University2 papers (2023–2025)Shifeng Yang · Ministry of Education of the People's Republic of China2 papers (2023–2025) · 2 papers (2023–2023)Bin Zhao · Central South University2 papers (2023–2025)Paul Zumbo · Cornell University2 papers (2022–2024)Sara Garamszegi · Broad Institute2 papers (2012–2013)Jingli Cao · Cornell University2 papers (2022–2024)Eric A. Franzosa · Harvard University2 papers (2012–2013)Doron Betel · Cornell University2 papers (2022–2024)Jason K. Eshraghian · University of Michigan–Ann Arbor2 papers (2023–2023)Jiacheng Li · Nanjing University of Chinese Medicine2 papers (2023–2025)Biying Sun · Nanjing Agricultural University2 papers (2023–2025)Jiaqi Jin · Guangzhou University of Chinese Medicine2 papers (2023–2025)Léah Pollet · McGill University2 papers (2022–2024)