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José M. Muiño

Federal Institute for Risk Assessment ·
🔎 Find collaborators in Molecular Biology · Plant Science →
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Area of research
Molecular Biology · Plant Science
Research interest
Research interests include Plant Molecular Biology Research, Plant Reproductive Biology, Photosynthetic Processes and Mechanisms, and Plant Gene Expression Analysis.
h-index
26
citations
4,386
works
92
NIH funding
primary concept
email

Recent publications

Cell Painting PLUS: expanding the multiplexing capacity of Cell Painting-based phenotypic profiling using iterative staining-elution cycles
Nature Communications 2025cited by 4position: middledoi
The role of FRUITFULL controlling cell cycle during early flower development revealed by time-series snRNA-seq experiments
Genome biology 2025cited by 1position: lastdoi
AP1 is a pioneer transcription factor that programmes cell fate through MADS-domain protein tetramerisation
Genome biology 2025cited by 1position: middledoi
Auxin-dependent post-translational regulation of MONOPTEROS in the Arabidopsis root
Cell Reports 2024cited by 13position: middledoi
Natural genetic variation in GLK1-mediated photosynthetic acclimation in response to light
BMC Plant Biology 2024cited by 6position: firstdoi
MatK impacts differential chloroplast translation by limiting spliced tRNA‐K(<scp>UUU</scp>) abundance
The Plant Journal 2024cited by 6position: firstdoi
Dual specificity and target gene selection by the MADS-domain protein FRUITFULL
Nature Plants 2023cited by 35position: lastdoi
Arabidopsis <scp>BBX14</scp> is involved in high light acclimation and seedling development
The Plant Journal 2023cited by 11position: middledoi
A Hands-On Guide to Generate Spatial Gene Expression Profiles by Integrating scRNA-seq and 3D-Reconstructed Microscope-Based Plant Structures
Methods in molecular biology 2023cited by 2position: lastdoi
A 3D gene expression atlas of the floral meristem based on spatial reconstruction of single nucleus RNA sequencing data
Nature Communications 2022cited by 71position: lastdoi
The intervening domain is required for DNA-binding and functional identity of plant MADS transcription factors
Nature Communications 2021cited by 91position: middledoi
Single‐nucleus RNA sequencing of plant tissues using a nanowell‐based system
The Plant Journal 2021cited by 53position: middledoi
Cell identity specification in plants: lessons from flower development
Journal of Experimental Botany 2021cited by 32position: middledoi
The Chloroplast RNA Binding Protein CP31A Has a Preference for mRNAs Encoding the Subunits of the Chloroplast NAD(P)H Dehydrogenase Complex and Is Required for Their Accumulation
International Journal of Molecular Sciences 2020cited by 12position: middledoi
Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks
Molecular Systems Biology 2019cited by 62position: middledoi
Long ncRNA A-ROD activates its target gene DKK1 at its release from chromatin
Nature Communications 2018cited by 52position: middledoi
PUMPKIN, the Sole Plastid UMP Kinase, Associates with Group II Introns and Alters Their Metabolism
PLANT PHYSIOLOGY 2018cited by 31position: middledoi
Transcriptomic basis for reinforcement of elm antiherbivore defence mediated by insect egg deposition
Molecular Ecology 2018cited by 26position: middledoi
Ectopic Transplastomic Expression of a Synthetic MatK Gene Leads to Cotyledon-Specific Leaf Variegation
Frontiers in Plant Science 2018cited by 18position: middledoi
PISTILLATA paralogs in Tarenaya hassleriana have diverged in interaction specificity
BMC Plant Biology 2018cited by 4position: middledoi
Cancerepisys – Integrative Analysis Of Epigenetic Networks That Determine The Chronic Lymphocytic Leukemia Disease State
Zenodo (CERN European Organization for Nuclear Research) 2018cited by 0position: middledoi
FRUITFULL controls SAUR10 expression and regulates Arabidopsis growth and architecture
Journal of Experimental Botany 2017cited by 123position: middledoi
Profiling Nucleosome Occupancy by MNase-seq: Experimental Protocol and Computational Analysis
Methods in molecular biology 2017cited by 32position: middledoi
Evolution of DNA-Binding Sites of a Floral Master Regulatory Transcription Factor
Molecular Biology and Evolution 2015cited by 44position: firstdoi

Grants

No grants ingested yet.

Frequent collaborators

Kerstin Kaufmann · Humboldt-Universität zu Berlin15 papers (2015–2025)Cezary Smaczniak · Humboldt-Universität zu Berlin7 papers (2021–2025)Xiaocai Xu · University of Michigan6 papers (2021–2025) · 5 papers (2015–2023)Dario Leister · Urologische Klinik München3 papers (2018–2023)Manuel Neumann · Humboldt-Universität zu Berlin3 papers (2022–2025)Peilin Chen · Hebei Medical University3 papers (2023–2025)Uwe Ohler · Max Delbrück Center3 papers (2018–2024)Martin Vingron · Freie Universität Berlin3 papers (2015–2019)Christian Schmitz‐Linneweber · Humboldt-Universität zu Berlin3 papers (2018–2024)Stephan Stilgenbauer · Spital STS2 papers (2018–2019)Sabrina J. Kugler · Universität Ulm2 papers (2018–2019)Daniel Remondini · University of Edinburgh2 papers (2018–2019)Sabrina Schumacher · German Cancer Research Center2 papers (2018–2019)Sebastian Großmann · Max Planck Institute for Terrestrial Microbiology2 papers (2018–2019) · 2 papers (2017–2023)Alexandra M. Poos · German Cancer Research Center2 papers (2018–2019)Julia Schumacher · Federal Institute For Materials Research and Testing2 papers (2022–2023)Vladimir B. Teif · University of Essex2 papers (2018–2019)Naveed Ishaque · Heidelberg University2 papers (2018–2019)
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