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Avinash Sreedasyam

University of Alabama in Huntsville · US
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Area of research
Agronomy and Crop Science · Genetics
Research interest
Research interests include Biology, Genome, Genetics, Polyploid, Gene, and Computational biology.
h-index
citations
3,047
works
20
NIH funding
primary concept
email

Recent publications

A sorghum pangenome reference improves global crop trait discovery
Nature 2026cited by 5position: middledoi
The complex polyploid genome architecture of sugarcane
Nature 2024cited by 169position: middledoi
Genome resources for three modern cotton lines guide future breeding efforts
Nature Plants 2024cited by 32position: firstdoi
Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean
The Plant Journal 2024cited by 26position: middledoi
Relics of interspecific hybridization retained in the genome of a drought-adapted peanut cultivar
G3 Genes Genomes Genetics 2024cited by 1position: middledoi
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics
Nature Plants 2023cited by 88position: middledoi
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
Nucleic Acids Research 2023cited by 71position: firstdoi
GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
eLife 2022cited by 396position: middledoi
GENESPACE: syntenic pan-genome annotations for eukaryotes
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 15position: middledoi
Author response: GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
2022cited by 2position: middledoi
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass
Nature 2021cited by 254position: middledoi
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
Nature Communications 2021cited by 110position: middledoi
Gene-rich UV sex chromosomes harbor conserved regulators of sexual development
Science Advances 2021cited by 104position: middledoi
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
Nature Genetics 2020cited by 488position: middledoi
A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
Genome biology 2020cited by 150position: middledoi
The genome sequence of segmental allotetraploid peanut Arachis hypogaea
Nature Genetics 2019cited by 816position: middledoi
PEATmoss (<i>Physcomitrella</i> Expression Atlas Tool): a unified gene expression atlas for the model plant <i>Physcomitrella patens</i>
The Plant Journal 2019cited by 99position: middledoi
The genomic landscape of molecular responses to natural drought stress in Panicum hallii
Nature Communications 2018cited by 148position: middledoi
PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
The Plant Journal 2018cited by 39position: middledoi
Multi-Omics Approach Identifies Molecular Mechanisms of Plant-Fungus Mycorrhizal Interaction
Frontiers in Plant Science 2016cited by 34position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Jeremy Schmutz · The University of Texas at Austin7 papers (2019–2024)David Goodstein · Lawrence Berkeley National Laboratory4 papers (2022–2024)Jayson Talag · University of Arizona3 papers (2020–2024)Jerry Jenkins · Mississippi State University3 papers (2020–2024)David Emms · Institute on Taxation and Economic Policy3 papers (2022–2022)Jane Grimwood · Biotechnology Institute3 papers (2019–2024)Alex Harkess · HudsonAlpha Institute for Biotechnology3 papers (2022–2022)Joseph W. Carlson · Lawrence Berkeley National Laboratory3 papers (2022–2022) · 3 papers (2022–2022)Melissa A. Wilson · National Human Genome Research Institute3 papers (2022–2022)Kerrie Barry · University of California System2 papers (2019–2020)Paul Grabowski · HudsonAlpha Institute for Biotechnology2 papers (2020–2024)Anna Lipzen · Université Claude Bernard Lyon 12 papers (2019–2020)Shengqiang Shu · University of Connecticut2 papers (2020–2024)Gary Stacey · University of California, Davis1 papers (2024–2024)Juliet C. Coates · University of Birmingham1 papers (2019–2019)Brigitte T. Hofmeister · University of Georgia1 papers (2020–2020)Christopher S. Henry · Argonne National Laboratory1 papers (2018–2018) · 1 papers (2024–2024)Lukas A. Mueller · Cornell University1 papers (2019–2019)
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