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Judith A. Blake

Australian Institute of Tropical Health and Medicine · AU
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Area of research
Molecular Biology
Research interest
Research interests include Biomedical Text Mining and Ontologies, Bioinformatics and Genomic Networks, Genomics and Phylogenetic Studies, and Gene expression and cancer classification.
h-index
67
citations
77,911
works
247
NIH funding
primary concept
email

Recent publications

A compendium of human gene functions derived from evolutionary modelling
Nature 2025cited by 30position: middledoi
The Gene Ontology knowledgebase in 2023
Genetics 2023cited by 2,638position: middledoi
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network
Nature Communications 2021cited by 23position: middledoi
Reactome and the Gene Ontology: digital convergence of data resources
Bioinformatics 2021cited by 23position: middledoi
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability
Journal of Biomedical Semantics 2016cited by 358position: middledoi
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities
Nucleic Acids Research 2016cited by 115position: middledoi
OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data
Journal of Biomedical Semantics 2016cited by 33position: middledoi
Modeling biochemical pathways in the gene ontology
Database 2016cited by 17position: lastdoi
The Non-Coding RNA Ontology (NCRO): a comprehensive resource for the unification of non-coding RNA biology
Journal of Biomedical Semantics 2016cited by 14position: middledoi
The development of non-coding RNA ontology
International Journal of Data Mining and Bioinformatics 2016cited by 10position: middledoi
Finding Our Way through Phenotypes
PLoS Biology 2015cited by 220position: middledoi
A semantic approach for knowledge capture of MIcroRNA-Target gene interactions
2015cited by 12position: middledoi
Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon
Journal of Biomedical Semantics 2014cited by 187position: middledoi
OMIT: Dynamic, Semi-Automated Ontology Development for the microRNA Domain
PLoS ONE 2014cited by 25position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Alan Ruttenberg · Georgetown University6 papers (2015–2016)Darren A. Natale · University of California San Diego6 papers (2014–2016)Ming Tan · National University of Singapore5 papers (2014–2016)Barry Smith · State University of New York5 papers (2015–2016)Jingshan Huang · The First Affiliated Hospital, Sun Yat-sen University5 papers (2014–2016)Karen Eilbeck · University of Utah5 papers (2014–2016)Glen M. Borchert · University of Iowa4 papers (2014–2016)Dejing Dou · Fudan University4 papers (2015–2016)Chris Mungall · Lawrence Berkeley National Laboratory4 papers (2014–2021)Zixing Liu · Guangzhou University of Chinese Medicine4 papers (2015–2016)Yongqun He · University of Michigan3 papers (2016–2016)Peter D’Eustachio · Pennsylvania State University3 papers (2016–2021)Xiaowei Wang · Tongji University3 papers (2015–2016) · 3 papers (2016–2016)Yu Lin · Sinovac Biotech3 papers (2016–2016) · 3 papers (2016–2016)Bin Wu · Third Affiliated Hospital of Sun Yat-sen University3 papers (2016–2016)James P. Balhoff · Renaissance Computing Institute2 papers (2014–2021)David P. Hill · Jackson Laboratory2 papers (2016–2021)Yvonne M. Bradford · Pennsylvania State University2 papers (2014–2016)
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