Area of research
Molecular Biology · Infectious Diseases
Research interest
Research interests include SARS-CoV-2 and COVID-19 Research, Genomics and Phylogenetic Studies, Mosquito-borne diseases and control, and Gut microbiota and health.
Library preparation strategy critically impacts RNA virus sensitivity in clinical metagenomics
Reducing Supply Chain Dependencies for Viral Genomic Surveillance: Get by with a Little HELP from Commercial Enzymes already in your Lab Freezer
Reducing Supply Chain Dependencies for Viral Genomic Surveillance: Get by with a Little HELP from Commercial Enzymes already in your Lab Freezer
Reducing Supply Chain Dependencies for Viral Genomic Surveillance: Get by with a Little HELP from Commercial Enzymes already in your Lab Freezer
PrimalScheme: open-source community resources for low-cost viral genome sequencing
Tracking arboviruses, their transmission vectors and potential hosts by nanopore sequencing of mosquitoes.
Determining the optimal route of faecal microbiota transplant in patients with ulcerative colitis: the STOP-Colitis pilot RCT
FindingNemo (v.kit14): A Toolkit for DNA Extraction, Library Preparation and Purification for Ultra Long Nanopore Sequencing v1
A phylogenetics and variant calling pipeline to support SARS-CoV-2 genomic epidemiology in the UK.
Determining the optimal route of faecal microbiota transplant in patients with ulcerative colitis: the STOP-Colitis pilot RCT
2024cited by 0position: contributor
APOBEC3 deaminase editing in mpox virus as evidence for sustained human transmission since at least 2016
APOBEC3 deaminase editing in mpox virus as evidence for sustained human transmission since at least 2016.
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1.
Prevalence and Persistence of Antibiotic Resistance Determinants in the Gut of Travelers Returning to the United Kingdom is Associated with Colonization by Pathogenic Escherichiacoli
Multiplex MinION sequencing suggests enteric adenovirus F41 genetic diversity comparable to pre-COVID-19 era
Context-specific emergence and growth of the SARS-CoV-2 Delta variant
Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil
Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil.
Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B.1.1.7
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK.
Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence.
Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing.
Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing
Genomic Sequencing of SARS-CoV-2 in Rwanda: evolution and regional dynamics
FindingNemo: A Toolkit of CoHex- and Glass Bead-based Protocols for Ultra-Long Sequencing on ONT Platforms v1