Area of research
Virology · Infectious Diseases
Research interest
Research interests include HIV Research and Treatment, COVID-19 epidemiological studies, Hepatitis C virus research, and HIV/AIDS drug development and treatment.
Fitness-driven emergence and lineage replacement underpin the global resurgence of GII.17 noroviruses
The utility of integrating nanopore sequencing into routine HIV-1 drug resistance surveillance
Phylogenetic insights into the early spread of the SARS-CoV-2 Alpha variant across Europe.
The utility of integrating nanopore sequencing into routine HIV-1 drug resistance surveillance.
An evolutionary approach to identify mammalian adaptive mutations in the avian influenza polymerase complex
Genomic surveillance uncovers regional variation in HCV transmission networks in rural United States.
Emergence of Novel Norovirus GII.4 Variant.
Validation of dried blood spots for capturing hepatitis C virus diversity for genomic surveillance.
Validation of dried blood spots for capturing hepatitis C virus diversity for genomic surveillance
Inferring the multiplicity of founder variants initiating HIV-1 infection: a systematic review and individual patient data meta-analysis
Inferring the multiplicity of founder variants initiating HIV-1 infection: a systematic review and individual patient data meta-analysis.
Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves
Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era
Characterising within-hospitalSARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves.
Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era.
Comparative assessment of methods for short-term forecasts of COVID-19 hospital admissions in England at the local level
Using high-resolution contact networks to evaluate SARS-CoV-2 transmission and control in large-scale multi-day events
Comparative assessment of methods for short-term forecasts of COVID-19 hospital admissions in England at the local level.
Simulating respiratory disease transmission within and between classrooms to assess pandemic management strategies at schools
The local burden of disease during the first wave of the COVID-19 epidemic in England: estimation using different data sources from changing surveillance practices
Identification of Genetically Related HCV Infections Among Self-Described Injecting Partnerships.
Leveraging genomic surveillance to enhance elimination strategies for hepatitis C virus.
Leveraging genomic surveillance to enhance elimination strategies for hepatitis C virus
Publisher Correction: Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves
Transmission dynamics of SARS-CoV-2 in a strictly-Orthodox Jewish community in the UK
Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England
Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England.
Increased mortality in community-tested cases of SARS-CoV-2 lineage B.1.1.7.
The impact of non-pharmaceutical interventions on SARS-CoV-2 transmission across 130 countries and territories.
Quarantine and testing strategies in contact tracing for SARS-CoV-2: a modelling study