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Deniz Dalkara

Centre National de la Recherche Scientifique · FR
Area of research
Molecular Biology · Cellular and Molecular Neuroscience
Research interest
Research interests include Retinal Development and Disorders, Photoreceptor and optogenetics research, Virus-based gene therapy research, and CRISPR and Genetic Engineering.
h-index
51
citations
8,504
works
210
NIH funding
primary concept
Biology
email

Recent publications

Ocular gene therapy mediated by AAV vectors: an overview of immunosuppressive treatments and immunomonitoring of patients involved in clinical trials
Progress in Retinal and Eye Research 2026cited by 0position: contributordoi
Impact of DNase digestion on titer measurements of engineered adeno-associated virus serotypes.
2025cited by 1position: contributordoi
Ectopic expression of two cone opsins in mouse RGCs results in opposite responses to light stimulation, likely due to differential G protein activation
2025cited by 0position: contributordoi
Reactivating the phototransduction cascade with a mutation agnostic gene therapy preserves vision in rod-cone dystrophies
iScience 2025cited by 0position: contributordoi
AAV-delivered CRISPR-Cas9 elicits persistent retinal immune responses compared with transient responses to RNP
2025cited by 0position: contributordoi
Characterization of anti-AAV2 neutralizing antibody levels in sheep prior to and following intravitreal AAV2.7m8 injection
Gene Therapy 2024cited by 2position: middledoi
Characterization of anti-AAV2 neutralizing antibody levels in sheep prior to and following intravitreal AAV2.7m8 injection.
2024cited by 1position: contributordoi
The Role of Thermal Stability in AAV Titration of Engineered Variants
2024cited by 0position: contributordoi
Optimal sequencing depth for measuring the concentrations of molecular barcodes
2024cited by 0position: contributordoi
Inducible nonhuman primate models of retinal degeneration for testing end-stage therapies.
2023cited by 9position: contributordoi
ACIDES: on-line monitoring of forward genetic screens for protein engineering.
2023cited by 3position: contributordoi
Cellular Immune Responses Induced by Subretinal AAV Gene Transfer can be Restrained by the Subretinal Associated Immune Inhibition Mechanism
2023cited by 0position: contributordoi
Uncursing winner’s curse: on-line monitoring of directed evolution convergence
2023cited by 0position: contributordoi
Early and late stage gene therapy interventions for inherited retinal degenerations.
2022cited by 129position: contributordoi
Systemic and local immune responses to intraocular AAV vector administration in non-human primates.
2022cited by 51position: contributordoi
Numb regulates Tau levels and prevents neurodegeneration in tauopathy mouse models.
2022cited by 14position: contributordoi
Outer retinal transduction by AAV2-7m8 following intravitreal injection in a sheep model of CNGA3 achromatopsia.
2022cited by 12position: contributordoi
Reactivating the phototransduction cascade by universally applicable gene therapy preserves retinal function in Rod-Cone dystrophy
2022cited by 2position: contributordoi
Partial recovery of visual function in a blind patient after optogenetic therapy
Nature Medicine 2021cited by 679position: middledoi
Partial recovery of visual function in a blind patient after optogenetic therapy.
2021cited by 456position: contributordoi
Optogenetic therapy: high spatiotemporal resolution and pattern discrimination compatible with vision restoration in non-human primates
Communications Biology 2021cited by 123position: middledoi
Optogenetic therapy: high spatiotemporal resolution and pattern discrimination compatible with vision restoration in non-human primates.
2021cited by 95position: contributordoi
Chronic nicotine increases midbrain dopamine neuron activity and biases individual strategies towards reduced exploration in mice.
2021cited by 31position: contributordoi
Outer retinal transduction by AAV2-7m8 following intravitreal injection in a sheep model of CNGA3 achromatopsia
Gene Therapy 2021cited by 12position: middledoi
Functional ultrasound imaging of the spreading activity following optogenetic stimulation of the rat visual cortex
2021cited by 1position: contributordoi
Chronic nicotine increases midbrain dopamine neuron activity and biases individual strategies towards reduced exploration in a foraging task
2021cited by 0position: contributordoi
Neural circuits in the mouse retina support color vision in the upper visual field.
2020cited by 103position: contributordoi
Advancing Clinical Trials for Inherited Retinal Diseases: Recommendations from the Second Monaciano Symposium
Translational Vision Science & Technology 2020cited by 90position: middledoi
In vivo-directed evolution of adeno-associated virus in the primate retina.
2020cited by 90position: contributordoi
Advancing Clinical Trials for Inherited Retinal Diseases: Recommendations from the Second Monaciano Symposium.
2020cited by 82position: contributordoi

Grants

No grants ingested yet.

Frequent collaborators

· 24 papers (2020–2026)Serge Picaud · Inserm13 papers (2016–2023) · 9 papers (2019–2023)José-Alain Sahel · University of Sheffield7 papers (2019–2023)U. Ferrari · Elsevier, Inc.6 papers (2020–2024)Emilia A. Zin · Universidade Federal do Rio de Janeiro5 papers (2023–2025)José‐Alain Sahel · Centre National de la Recherche Scientifique3 papers (2016–2021) · 3 papers (2021–2024)Philipp Berens · Stanford University3 papers (2019–2020)C. Nguyen · Institut de Biologie Paris-Seine3 papers (2020–2021)F. Marti · Université Pierre et Marie Curie UFR de Biologie3 papers (2020–2021)Sarah Mondoloni · University of Lausanne3 papers (2020–2021)G. Gauvain · Université d'Orléans3 papers (2020–2021)Alexandre Mourot · ESPCI Paris3 papers (2020–2021)Divya Ail · Centre National de la Recherche Scientifique3 papers (2022–2025)Romain Durand-de Cuttoli · University of Palermo3 papers (2020–2021)Melissa Desrosiers · INSERM3 papers (2022–2024)Philippe Faure · Centre National de la Recherche Scientifique3 papers (2020–2021)Isabelle Audo · Inserm2 papers (2021–2022)Maya Ross · Hebrew University of Jerusalem2 papers (2021–2024)