Area of research
Molecular Biology · Ecology
Research interest
Research interests include Genomics and Phylogenetic Studies, Bacteriophages and microbial interactions, Gut microbiota and health, and SARS-CoV-2 and COVID-19 Research.
Evidence supporting the first secondary chromosome in Actinobacteria as a hallmark of the <i>Embleya</i> genus.
Assessing Bias and Reproducibility of Viral Metagenomics Methods for the Combined Detection of Faecal RNA and DNA Viruses.
DNA reference reagents isolate biases in microbiome profiling: a global multi-lab study
Evidence supporting the first secondary chromosome in actinobacteria as a hallmark of the <i>Embleya</i> genus
The nisin O cluster: species dissemination, candidate leader peptide proteases and the role of regulatory systems.
P3ANUT: An enhanced DNA sequencing analysis platform for uncovering and correcting errors in peptide display library screening
Nanopore and Illumina sequencing reveal different viral populations from human gut samples
Genomic diversity and antimicrobial resistance in clinical <i>Klebsiella pneumoniae</i> isolates from tertiary hospitals in Southern Ghana
Induced Burkholderia prophages detected from the hemoculture: a biomarker for Burkholderia pseudomallei infection
Assessing Bias and Reproducibility of Viral Metagenomics Methods for the Combined Detection of Faecal RNA and DNA Viruses
Genomic characterization of colistin-resistant Klebsiella pneumoniae isolated from intensive care unit patients in Egypt.
A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses
Nanopore and Illumina Sequencing Reveal Different Viral Populations from Human Gut Samples
A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses
COVID-19 due to the B.1.617.2 (Delta) variant compared to B.1.1.7 (Alpha) variant of SARS-CoV-2: a prospective observational cohort study
The Cynomolgus Macaque Intestinal Mycobiome Is Dominated by the <i>Kazachstania</i> Genus and <i>K. pintolopesii</i> Species.
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa
The Origin of Plasma-Derived Bacterial Extracellular Vesicles in Healthy Individuals and Patients with Inflammatory Bowel Disease: A Pilot Study.
Characterization of a pESI-like plasmid and analysis of multidrug-resistant <i>Salmonella enterica</i> Infantis isolates in England and Wales.
Emergence of Resistance to Fluoroquinolones and Third-Generation Cephalosporins in <i>Salmonella</i> Typhi in Lahore, Pakistan.
Preterm Infants Harbour a Rapidly Changing Mycobiota That Includes <i>Candida</i> Pathobionts.
Sequencing smart: De novo sequencing and assembly approaches for a non-model mammal.
Genomic diversity of <i>Escherichia coli</i> isolates from non-human primates in the Gambia.
Complete Genome Sequence of the Model Rhizosphere Strain Azospirillum brasilense Az39, Successfully Applied in Agriculture