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Wouter Saelens

University of Lausanne · BE
Area of research
Molecular Biology · Immunology
Research interest
Research interests include Single-cell and spatial transcriptomics, Gene Regulatory Network Analysis, Bioinformatics and Genomic Networks, and Gene expression and cancer classification.
h-index
24
citations
10,947
works
88
NIH funding
primary concept
Biology
email

Recent publications

Spatially restricted and ontogenically distinct hepatic macrophages are required for tissue repair
Immunity 2025cited by 64position: middledoi
Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes
eLife 2023cited by 71position: middledoi
Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
Cell 2022cited by 920position: middledoi
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly
Science 2022cited by 831position: middledoi
A scalable SCENIC workflow for single-cell gene regulatory network analysis
Nature Protocols 2020cited by 1,517position: middledoi
Trajectory-based differential expression analysis for single-cell sequencing data
Nature Communications 2020cited by 840position: middledoi
TinGa: fast and flexible trajectory inference with Growing Neural Gas
Bioinformatics 2020cited by 32position: middledoi
A comparison of single-cell trajectory inference methods
Nature Biotechnology 2019cited by 1,711position: firstdoi
The transcription factor Zeb2 regulates development of conventional and plasmacytoid DCs by repressing Id2
The Journal of Experimental Medicine 2016cited by 148position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Yvan Saeys · Institute of Molecular Biology and Biotechnology5 papers (2016–2020) · 4 papers (2019–2020)Helena Todorov · University of Lausanne2 papers (2019–2020) · 1 papers (2016–2016)Christopher Flerin · KU Leuven1 papers (2020–2020)Dries De Maeyer · KU Leuven1 papers (2020–2020) · 1 papers (2016–2016)Hector Roux de Bézieux · University of California, Berkeley1 papers (2020–2020)Helen White‐Cooper · Cardiff University1 papers (2023–2023) · 1 papers (2020–2020)Sarah R. Stern · Massachusetts Institute of Technology1 papers (2023–2023)Amelie A. Raz · Whitehead Institute for Biomedical Research1 papers (2023–2023)Koen Van den Berge · Johnson & Johnson (United States)1 papers (2020–2020)Margaret T. Fuller · Stanford Medicine1 papers (2023–2023)Maxime De Waegeneer · VIB-KU Leuven Center for Brain & Disease Research1 papers (2020–2020)Sharvani Mahadevaraju · St. Mary's College of Maryland1 papers (2023–2023)Joke Reumers · KU Leuven1 papers (2020–2020)Julie A. Brill · University of New Brunswick1 papers (2023–2023)Liesbet Martens · University College Ghent1 papers (2016–2016)Jasmine R Grey · Johns Hopkins Medicine1 papers (2023–2023)