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Siddarth Selvaraj

Arima Genomics (United States) · US
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Area of research
Molecular Biology · Plant Science
Research interest
Research interests include Genomics and Chromatin Dynamics, Chromosomal and Genetic Variations, Genomics and Phylogenetic Studies, and Epigenetics and DNA Methylation.
h-index
19
citations
18,216
works
35
NIH funding
primary concept
Biology
email

Recent publications

Semi-automated assembly of high-quality diploid human reference genomes
Nature 2022cited by 223position: middledoi
Towards complete and error-free genome assemblies of all vertebrate species
Nature 2021cited by 3,000position: middledoi
Telomere-to-telomere assembly of a complete human X chromosome
Nature 2020cited by 826position: middledoi
Subtle changes in chromatin loop contact propensity are associated with differential gene regulation and expression
Nature Communications 2019cited by 149position: middledoi
Chromatin architecture reorganization during stem cell differentiation
Nature 2015cited by 1,797position: middledoi
Human body epigenome maps reveal noncanonical DNA methylation variation
Nature 2015cited by 769position: middledoi
Integrative analysis of haplotype-resolved epigenomes across human tissues
Nature 2015cited by 236position: middledoi
5mC Oxidation by Tet2 Modulates Enhancer Activity and Timing of Transcriptome Reprogramming during Differentiation
Molecular Cell 2014cited by 346position: middledoi
CRISPR Reveals a Distal Super-Enhancer Required for Sox2 Expression in Mouse Embryonic Stem Cells
PLoS ONE 2014cited by 220position: middledoi
A high-resolution map of the three-dimensional chromatin interactome in human cells
Nature 2013cited by 1,295position: middledoi
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
Nature Biotechnology 2013cited by 326position: firstdoi
Bayesian Inference of Spatial Organizations of Chromosomes
PLoS Computational Biology 2013cited by 221position: middledoi
Topological domains in mammalian genomes identified by analysis of chromatin interactions
Nature 2012cited by 7,347position: middledoi
HiCNorm: removing biases in Hi-C data via Poisson regression
Bioinformatics 2012cited by 275position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Bing Ren · Hebei University of Engineering10 papers (2012–2015)Jesse R. Dixon · Salk Institute for Biological Studies6 papers (2012–2015)Ah Young Lee · Seoul National University5 papers (2013–2015)Anthony D. Schmitt · Arima Genomics (United States)4 papers (2013–2019)Joseph R. Ecker · Salk Institute for Biological Studies3 papers (2015–2015)Fulai Jin · Case Western Reserve University3 papers (2013–2014)Inkyung Jung · Korea Advanced Institute of Science and Technology3 papers (2015–2015)Zhen Ye · First Affiliated Hospital of University of South China3 papers (2013–2015)Ming Hu · University of Science and Technology of China3 papers (2012–2013)Jun S. Liu · Harvard University3 papers (2012–2013)Nisha Rajagopal · Novartis (United States)3 papers (2015–2015)Ke Deng · RMIT University2 papers (2012–2013)Zhaohui Qin · Emory University2 papers (2012–2013)Feng Yue · Northwestern University2 papers (2012–2015)Samantha Kuan · University of California San Diego2 papers (2014–2015)Audrey Kim · Grambling State University2 papers (2012–2015)Wei Xie · IE University2 papers (2015–2015)Manoj Hariharan · Salk Institute for Biological Studies2 papers (2015–2015)Yin Shen · Wuhan University2 papers (2012–2015) · 2 papers (2013–2015)
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