← back to search

Peter V. Kharchenko

Harvard University · US
🔎 Find collaborators in Molecular Biology · Neurology →
Search 5.9M scientists by topic, h-index, country & funding — free.
Area of research
Molecular Biology · Neurology
Research interest
Research interests include Single-cell and spatial transcriptomics, Genomics and Chromatin Dynamics, Neuroblastoma Research and Treatments, and Cancer Genomics and Diagnostics.
h-index
80
citations
38,431
works
248
NIH funding
primary concept
Biology
email

Recent publications

Mesenchymal thymic niche cells enable regeneration of the adult thymus and T cell immunity
Nature Biotechnology 2025cited by 8position: middledoi
Niche-derived Semaphorin 4A safeguards functional identity of myeloid-biased hematopoietic stem cells
Nature Aging 2025cited by 6position: middledoi
Single-cell multiomic human brain atlas reveals regulatory drivers of cortical regionality
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 1position: middledoi
Single-cell analysis of immune and stroma cell remodeling in clear cell renal cell carcinoma primary tumors and bone metastatic lesions
Genome Medicine 2024cited by 51position: middledoi
Mapping human tissues with highly multiplexed RNA in situ hybridization
Nature Communications 2024cited by 32position: middledoi
Coordinated, multicellular patterns of transcriptional variation that stratify patient cohorts are revealed by tensor decomposition
Nature Biotechnology 2024cited by 27position: lastdoi
Joint single-cell genetic and transcriptomic analysis reveal pre-malignant SCP-like subclones in human neuroblastoma
Molecular Cancer 2024cited by 19position: middledoi
An atlas of healthy and injured cell states and niches in the human kidney
Nature 2023cited by 624position: middledoi
Dissecting the immune suppressive human prostate tumor microenvironment via integrated single-cell and spatial transcriptomic analyses
Nature Communications 2023cited by 236position: middledoi
Mapping Human Tissues with Highly Multiplexed RNA in situ Hybridization
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 4position: middledoi
The immune cell atlas of human neuroblastoma
Cell Reports Medicine 2022cited by 96position: middledoi
A transcriptional metastatic signature predicts survival in clear cell renal cell carcinoma
Nature Communications 2022cited by 81position: middledoi
Liver stromal cells restrict macrophage maturation and stromal IL-6 limits the differentiation of cirrhosis-linked macrophages
Journal of Hepatology 2022cited by 51position: middledoi
Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse
Nature 2022cited by 5position: middledoi
Comparative cellular analysis of motor cortex in human, marmoset and mouse
Nature 2021cited by 820position: middledoi
Single-cell proteomic and transcriptomic analysis of macrophage heterogeneity using SCoPE2
Genome biology 2021cited by 508position: middledoi
Cell segmentation in imaging-based spatial transcriptomics
Nature Biotechnology 2021cited by 412position: lastdoi
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Nature 2021cited by 372position: middledoi
The triumphs and limitations of computational methods for scRNA-seq
Nature Methods 2021cited by 328position: firstdoi
RNA velocity—current challenges and future perspectives
Molecular Systems Biology 2021cited by 302position: middledoi
Human prostate cancer bone metastases have an actionable immunosuppressive microenvironment
Cancer Cell 2021cited by 268position: lastdoi
Rewiring of human neurodevelopmental gene regulatory programs by human accelerated regions
Neuron 2021cited by 202position: middledoi
Single-cell transcriptomics of human embryos identifies multiple sympathoblast lineages with potential implications for neuroblastoma origin
Nature Genetics 2021cited by 196position: middledoi
Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
Nature Communications 2021cited by 189position: middledoi
Single-nuclei transcriptomes from human adrenal gland reveal distinct cellular identities of low and high-risk neuroblastoma tumors
Nature Communications 2021cited by 99position: middledoi
Population sequencing data reveal a compendium of mutational processes in the human germ line
Science 2021cited by 73position: middledoi
Dental cell type atlas reveals stem and differentiated cell types in mouse and human teeth
Nature Communications 2020cited by 251position: middledoi
Identification of epilepsy-associated neuronal subtypes and gene expression underlying epileptogenesis
Nature Communications 2020cited by 229position: middledoi
Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse
bioRxiv (Cold Spring Harbor Laboratory) 2020cited by 88position: middledoi
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
bioRxiv (Cold Spring Harbor Laboratory) 2020cited by 63position: middledoi

Grants

CAREER: Statistical modeling of single-cell states
NSF1452964$623,5152015–2021PIRePORTER

Frequent collaborators

Shenglin Mei · Harvard University8 papers (2021–2024)David T. Scadden · Harvard University6 papers (2014–2025)Jerold Chun · University of California San Diego6 papers (2016–2025)Jean Fan · Transgenomic (United States)6 papers (2014–2021)Igor Adameyko · Karolinska University Hospital5 papers (2017–2024)Kun Zhang · Yuncheng University5 papers (2016–2024)Viktor Petukhov · Fleet Science Center5 papers (2018–2021)Youmna Kfoury · MGH Institute of Health Professions4 papers (2021–2024)Ninib Baryawno · Karolinska University Hospital4 papers (2022–2025)Taghreed Hirz · Harvard University4 papers (2021–2024)Ninib Baryawno · Harvard University4 papers (2021–2024)Philip J. Saylor · Harvard University4 papers (2021–2024)Per Kogner · Karolinska University Hospital4 papers (2021–2024)Konstantin Khodosevich · University of Copenhagen4 papers (2019–2021)David B. Sykes · University of California, Riverside4 papers (2021–2024)Blue B. Lake · Beth Israel Deaconess Medical Center4 papers (2017–2024)John H. Shin · Penn Center for AIDS Research3 papers (2021–2024)Jinghui Song · Qingdao University3 papers (2023–2025)Jian‐Bing Fan · Southern Medical University3 papers (2016–2024)Chin‐Lee Wu · Massachusetts General Hospital3 papers (2022–2024)
Looking for a research collaborator?
Search millions of scientists by field, institution, impact, and funding status — see their work, find their email, and reach out directly.
Find collaborators in Molecular Biology · Neurology →