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Emily C. Fogarty

University of British Columbia · CA
Area of research
Molecular Biology · Physiology
Research interest
Research interests include Gut microbiota and health, Diet and metabolism studies, Genomics and Phylogenetic Studies, and Clostridium difficile and Clostridium perfringens research.
h-index
14
citations
1,659
works
47
NIH funding
primary concept
email

Recent publications

Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess
Nature Microbiology 2024cited by 62position: middledoi
A cryptic plasmid is among the most numerous genetic elements in the human gut
Cell 2024cited by 58position: firstdoi
Metabolic independence drives gut microbial colonization and resilience in health and disease
Genome biology 2023cited by 100position: middledoi
Microbes with higher metabolic independence are enriched in human gut microbiomes under stress
eLife 2023cited by 20position: middledoi
Functional Insights into the Kelp Microbiome from Metagenome-Assembled Genomes
mSystems 2022cited by 88position: middledoi
Microbial Diversity and Interaction Specificity in Kombucha Tea Fermentations
mSystems 2022cited by 87position: middledoi
High molecular weight DNA extraction strategies for long‐read sequencing of complex metagenomes
Molecular Ecology Resources 2022cited by 53position: middledoi
A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome
Nature Communications 2022cited by 50position: middledoi
The Diversity and Functional Capacity of Microbes Associated with Coastal Macrophytes
mSystems 2022cited by 28position: middledoi
Low diversity and microdiversity of comammox bacteria in wastewater systems suggest specific adaptations within the Ca. Nitrospira nitrosa cluster
Water Research 2022cited by 27position: middledoi
Community-led, integrated, reproducible multi-omics with anvi’o
Nature Microbiology 2020cited by 960position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

A. Murat Eren · University of Chicago8 papers (2022–2024)Iva Veseli · University of Chicago4 papers (2022–2024)Michael Yu · Toyota Technological Institute at Chicago4 papers (2023–2024)Bana Jabrì · University of Chicago3 papers (2022–2023)Karen Lolans · University of Illinois Chicago3 papers (2022–2024)Andrea R. Watson · University of Chicago3 papers (2022–2023)Alon Shaiber · University of Chicago2 papers (2022–2023)Khashiff Miranda · Canadian Museum of Nature2 papers (2022–2022)Catherine A. Pfister · University of Chicago2 papers (2022–2022)Matthew S. Schechter · University of Chicago2 papers (2023–2024)Jessika Füssel · Carl von Ossietzky Universität Oldenburg2 papers (2023–2023)Amy D. Willis · University of Washington2 papers (2023–2024)Florian Trigodet · Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung2 papers (2022–2023)Brooke L. Weigel · Stanford University2 papers (2022–2022)Hilary G. Morrison · Dartmouth College2 papers (2022–2023)Courtney Grady · United States Geological Survey1 papers (2022–2022) · 1 papers (2022–2022)Roland Brosch · Institut Pasteur1 papers (2022–2022)Laurie E. Comstock · University of Chicago1 papers (2024–2024)Haydée De Clippeleir · Columbia University1 papers (2022–2022)