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Shankar Balasubramanian

University of Cambridge · GB
Area of research
Molecular Biology
Research interest
Research interests include DNA and Nucleic Acid Chemistry, Advanced biosensing and bioanalysis techniques, RNA Interference and Gene Delivery, and RNA and protein synthesis mechanisms.
h-index
118
citations
56,920
works
513
NIH funding
primary concept
Chemistry
email

Recent publications

5-methylcytosine and 5-hydroxymethylcytosine are synergistic biomarkers for early detection of colorectal cancer.
2026cited by 1position: contributordoi
Spatially tunable multiomic sequencing using light-driven combinatorial barcoding of molecules in tissues.
2026cited by 0position: contributordoi
Dissecting the Binding Interactions of the Chromatin Remodeler SMARCA4 with G-Quadruplex DNA.
2026cited by 0position: contributordoi
Degradation of G-quadruplex-binding proteins in chromatin using G4-ligand-based proteolysis-targeting chimeras.
2026cited by 0position: contributordoi
Sequencing DNA methylation and hydroxymethylation at co-occurring chromatin features.
2026cited by 0position: contributordoi
Optical control of gene expression using a DNA G-quadruplex targeting reversible photoswitch
Nature Chemistry 2025cited by 16position: lastdoi
KLF5 loss sensitizes cells to ATR inhibition and is synthetic lethal with ARID1A deficiency
Nature Communications 2025cited by 9position: middledoi
Optical control of gene expression using a DNA G-quadruplex targeting reversible photoswitch.
2025cited by 8position: contributordoi
SCoTCH-seq reveals that 5-hydroxymethylcytosine encodes regulatory information across DNA strands.
2025cited by 5position: contributordoi
SCoTCH-seq reveals that 5-hydroxymethylcytosine encodes regulatory information across DNA strands
Proceedings of the National Academy of Sciences 2025cited by 5position: lastdoi
Cancer Research in the Age of Spatial Omics: Lessons from IMAXT
Cancer Discovery 2025cited by 4position: middledoi
An unnatural base pair for the detection of epigenetic cytosine modifications in DNA.
2025cited by 3position: contributordoi
An unnatural base pair for the detection of epigenetic cytosine modifications in DNA
Nature Chemistry 2025cited by 3position: lastdoi
Selective Photocatalytic C-H Oxidation of 5-Methylcytosine in DNA.
2025cited by 2position: contributordoi
Commentary on 'Untargeted CUT&Tag reads are enriched at accessible chromatin and restrict identification of potential G4-forming sequences in G4-targeted CUT&Tag experiments'.
2025cited by 0position: contributordoi
Cryo-EM structures of NHEJ assemblies with nucleosomes.
2025cited by 0position: contributordoi
Commentary on ‘Untargeted CUT&Tag reads are enriched at accessible chromatin and restrict identification of potential G4-forming sequences in G4-targeted CUT&Tag experiments’
Nucleic Acids Research 2025cited by 0position: lastdoi
G-quadruplex DNA structure is a positive regulator of <i>MYC</i> transcription.
2024cited by 111position: contributordoi
Transcription-coupled repair of DNA–protein cross-links depends on CSA and CSB
Nature Cell Biology 2024cited by 53position: middledoi
An Upstream G-Quadruplex DNA Structure Can Stimulate Gene Transcription
ACS Chemical Biology 2024cited by 36position: lastdoi
An Upstream G-Quadruplex DNA Structure Can Stimulate Gene Transcription.
2024cited by 27position: contributordoi
Quantum computation from dynamic automorphism codes
Quantum 2024cited by 25position: middledoi
Glassy Word Problems: Ultraslow Relaxation, Hilbert Space Jamming, and Computational Complexity
Physical Review X 2024cited by 12position: firstdoi
Improved simultaneous mapping of epigenetic features and 3D chromatin structure via ViCAR.
2024cited by 6position: contributordoi
Spatially tuneable multi-omics sequencing using light-driven combinatorial barcoding of molecules in tissues
2024cited by 2position: contributordoi
Selective Photocatalytic C−H Oxidation of 5‐Methylcytosine in DNA
Angewandte Chemie 2024cited by 0position: contributordoi
Simultaneous sequencing of genetic and epigenetic bases in DNA
Nature Biotechnology 2023cited by 117position: lastdoi
Simultaneous sequencing of genetic and epigenetic bases in DNA.
2023cited by 96position: contributordoi
Chem-map profiles drug binding to chromatin in cells
Nature Biotechnology 2023cited by 68position: lastdoi
Floquet Codes without Parent Subsystem Codes
PRX Quantum 2023cited by 67position: lastdoi

Grants

No grants ingested yet.

Frequent collaborators

· 48 papers (2019–2026)David Tannahill · Wellcome Sanger Institute17 papers (2019–2026)David Tannahill · Cancer Research UK Cambridge Center14 papers (2013–2025)Marco Di Antonio · University of Genoa11 papers (2012–2023)Marco Di Antonio · Isabela State University10 papers (2019–2023)Sergio Martínez Cuesta · Cancer Research UK Cambridge Center9 papers (2017–2024)Pierre Murat · Cancer Research UK Cambridge Center9 papers (2012–2019)Dario Beraldi · Wellcome Centre for Molecular Parasitology7 papers (2013–2018)Giovanni Marsico · Cancer Research UK Cambridge Center7 papers (2015–2020)Wolf Reik · Babraham Institute6 papers (2013–2020)Xiaoyun Zhang · Sun Yat-sen Memorial Hospital6 papers (2020–2026)Jochen Spiegel · Technical University of Munich6 papers (2018–2025)Larry Melidis · University of Birmingham6 papers (2023–2025)Gregory J. Hannon · University of Cambridge5 papers (2019–2024)Shi-Qing Mao · Cancer Research UK Cambridge Center5 papers (2018–2021)Eun‐Ang Raiber · Cancer Research UK Cambridge Center5 papers (2014–2018)Katherine G. Zyner · Children's Medical Research Institute5 papers (2016–2020) · 5 papers (2014–2017)Xiaoyun Zhang · King University5 papers (2020–2025)Laura Bollepalli · University of Cambridge5 papers (2019–2023)