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Carolyn O’Connor

Salk Institute for Biological Studies · US
Area of research
Molecular Biology · Neurology
Research interest
Research interests include Single-cell and spatial transcriptomics, Neuroinflammation and Neurodegeneration Mechanisms, Epigenetics and DNA Methylation, and Genomics and Chromatin Dynamics.
h-index
25
citations
6,600
works
48
NIH funding
primary concept
Biology
email

Recent publications

Cell-type-specific effects of age and sex on human cortical neurons
Neuron 2024cited by 61position: middledoi
The β1-adrenergic receptor links sympathetic nerves to T cell exhaustion
Nature 2023cited by 228position: middledoi
Single-cell DNA methylation and 3D genome architecture in the human brain
Science 2023cited by 151position: middledoi
Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain
Nature 2023cited by 126position: middledoi
CTLA-4 blockade induces a microglia-Th1 cell partnership that stimulates microglia phagocytosis and anti-tumor function in glioblastoma
Immunity 2023cited by 107position: middledoi
Human microglia maturation is underpinned by specific gene regulatory networks
Immunity 2023cited by 60position: middledoi
Brain-wide correspondence of neuronal epigenomics and distant projections
Nature 2023cited by 58position: middledoi
Canonical BAF complex activity shapes the enhancer landscape that licenses CD8+ T cell effector and memory fates
Immunity 2023cited by 46position: middledoi
Single-cell DNA Methylome and 3D Multi-omic Atlas of the Adult Mouse Brain
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 22position: middledoi
Deletion mapping of regulatory elements for GATA3 in T cells reveals a distal enhancer involved in allergic diseases
The American Journal of Human Genetics 2023cited by 19position: middledoi
Brain-wide Correspondence Between Neuronal Epigenomics and Long-Distance Projections
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 0position: middledoi
Leaf cell-specific and single-cell transcriptional profiling reveals a role for the palisade layer in UV light protection
The Plant Cell 2022cited by 94position: middledoi
Microglia use TAM receptors to detect and engulf amyloid β plaques
Nature Immunology 2021cited by 491position: middledoi
DNA methylation atlas of the mouse brain at single-cell resolution
Nature 2021cited by 302position: middledoi
Epigenomic diversity of cortical projection neurons in the mouse brain
Nature 2021cited by 73position: middledoi
Publisher Correction: Immune-evasive human islet-like organoids ameliorate diabetes
Nature 2021cited by 1position: middledoi
Immune-evasive human islet-like organoids ameliorate diabetes
Nature 2020cited by 328position: middledoi
Tuft Cells Inhibit Pancreatic Tumorigenesis in Mice by Producing Prostaglandin D2
Gastroenterology 2020cited by 88position: middledoi
Brain cell type–specific enhancer–promoter interactome maps and disease <b>-</b> risk association
Science 2019cited by 784position: middledoi
Simultaneous profiling of 3D genome structure and DNA methylation in single human cells
Nature Methods 2019cited by 353position: middledoi
Robust single-cell DNA methylome profiling with snmC-seq2
Nature Communications 2018cited by 210position: middledoi
An environment-dependent transcriptional network specifies human microglia identity
Science 2017cited by 1,299position: middledoi
miR-25/93 mediates hypoxia-induced immunosuppression by repressing cGAS
Nature Cell Biology 2017cited by 143position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Joseph R. Nery · Salk Institute for Biological Studies4 papers (2018–2024)Joseph R. Ecker · Salk Institute for Biological Studies4 papers (2018–2024)Dan Chen · Salk Institute for Biological Studies3 papers (2023–2023)Susan M. Kaech · Salk Institute for Biological Studies3 papers (2023–2023)Chongyuan Luo · University of California San Diego3 papers (2018–2024)Conor Fitzpatrick · Salk Institute for Biological Studies3 papers (2017–2019)Rosa Castanon · Salk Institute for Biological Studies2 papers (2018–2024)Tiffany Tseng · Yale University2 papers (2020–2021)Christopher Liddle · Salk Institute for Biological Studies2 papers (2020–2021)Fritz Cayabyab · Salk Institute for Biological Studies2 papers (2020–2021)Thomas H. Mann · Salk Institute for Biological Studies2 papers (2023–2023)Eiji Yoshihara · University of California, Los Angeles2 papers (2020–2021)Ruth T. Yu · Salk Institute for Biological Studies2 papers (2020–2021)Emanuel Gasser · Salk Institute for Biological Studies2 papers (2020–2021)Nasun Hah · Fleet Science Center2 papers (2021–2023)Shixin Ma · Salk Institute for Biological Studies2 papers (2023–2023)Zong Wei · Nantong University2 papers (2020–2021)Greg Lemke · Salk Institute for Biological Studies2 papers (2021–2023)Jingtian Zhou · CAE (Canada)2 papers (2018–2019)Annette R. Atkins · Salk Institute for Biological Studies2 papers (2020–2021)