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Sebastian Wirkert

Heidelberg University · DE
Area of research
Radiology, Nuclear Medicine and Imaging · Biomedical Engineering
Research interest
Research interests include Optical Imaging and Spectroscopy Techniques, Photoacoustic and Ultrasonic Imaging, Target Tracking and Data Fusion in Sensor Networks, and Medical Image Segmentation Techniques.
h-index
14
citations
1,664
works
36
NIH funding
primary concept
email

Recent publications

The SPECTRAL Perfusion Arm Clamping dAtaset (SPECTRALPACA) for video-rate functional imaging of the skin
Scientific Data 2024cited by 5position: middledoi
Spectral imaging enables contrast agent–free real-time ischemia monitoring in laparoscopic surgery
Science Advances 2023cited by 37position: middledoi
Spectral imaging enables contrast agent-free real-time ischemia monitoring in laparoscopic surgery
medRxiv 2022cited by 4position: middledoi
Band selection for oxygenation estimation with multispectral/hyperspectral imaging
Biomedical Optics Express 2021cited by 17position: middledoi
Video-rate multispectral imaging in laparoscopic surgery: First-in-human application
arXiv (Cornell University) 2021cited by 6position: middledoi
batchgenerators - a python framework for data augmentation
Zenodo (CERN European Organization for Nuclear Research) 2020cited by 59position: middledoi
Light source calibration for multispectral imaging in surgery
International Journal of Computer Assisted Radiology and Surgery 2020cited by 8position: middledoi
Abstract: nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation
Informatik aktuell 2019cited by 610position: middledoi
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks
International Journal of Computer Assisted Radiology and Surgery 2019cited by 29position: middledoi
Live Monitoring of Haemodynamic Changes with Multispectral Image Analysis
Lecture notes in computer science 2019cited by 11position: middledoi
Task-specific multispectral band selection
arXiv (Cornell University) 2019cited by 0position: first
Analyzing Inverse Problems with Invertible Neural Networks
arXiv (Cornell University) 2018cited by 155position: middledoi
Domain and task specific multispectral band selection (Conference Presentation)
2018cited by 3position: firstdoi
Abstract: Physiological Parameter Estimation from Multispectral Images Unleashed
Informatik aktuell 2018cited by 0position: firstdoi
Tissue classification for laparoscopic image understanding based on multispectral texture analysis
Journal of Medical Imaging 2017cited by 27position: middledoi
Path Assignment Techniques For Vehicle Tracking
arXiv (Cornell University) 2017cited by 0position: lastdoi
Robust near real-time estimation of physiological parameters from megapixel multispectral images with inverse Monte Carlo and random forest regression
International Journal of Computer Assisted Radiology and Surgery 2016cited by 53position: firstdoi
Crowd-Algorithm Collaboration for Large-Scale Endoscopic Image Annotation with Confidence
Lecture notes in computer science 2016cited by 38position: middledoi
Why the association log-likelihood distance should be used for measurement-to-track association
2016cited by 12position: lastdoi
Tissue classification for laparoscopic image understanding based on multispectral texture analysis
Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE 2016cited by 10position: middledoi
A Complete Derivation Of The Association Log-Likelihood Distance For Multi-Object Tracking
arXiv (Cornell University) 2015cited by 1position: lastdoi
Endoscopic Sheffield Index for Unsupervised In Vivo Spectral Band Selection
Lecture notes in computer science 2014cited by 20position: firstdoi
Path assignment techniques for vehicle tracking
2014cited by 1position: lastdoi

Grants

No grants ingested yet.

Frequent collaborators

Lena Maier Hein · German Cancer Research Center17 papers (2014–2024)Anant Vemuri · German Cancer Research Center10 papers (2018–2023)Leonardo Ayala · German Cancer Research Center9 papers (2019–2024)Klaus Maier‐Hein · German Cancer Research Center7 papers (2016–2021)Fabian Isensee · Helmholtz-Institute Ulm5 papers (2018–2021)Tim Adler · German Cancer Research Center5 papers (2019–2023) · 5 papers (2014–2018)Silvia Seidlitz · German Cancer Research Center5 papers (2020–2024)Hannes Kenngott · Heidelberg University5 papers (2016–2018)Doğu Teber · Städtisches Klinikum Karlsruhe4 papers (2020–2023) · 4 papers (2020–2023) · 4 papers (2014–2017) · 4 papers (2014–2017)Benjamin Mayer · University Hospital Heidelberg4 papers (2016–2018)Minu D. Tizabi · German Cancer Research Center3 papers (2022–2024)Jan Sellner · German Cancer Research Center3 papers (2022–2024)Janek Gröhl · RWTH Aachen University3 papers (2016–2019)Alexander Seitel · German Cancer Research Center3 papers (2022–2024)Baowei Fei · The University of Texas at Dallas3 papers (2018–2021)Christian Stock · University of Lübeck3 papers (2016–2017)