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Jean‐Luc Jannink

Agricultural Research Service ·
Area of research
Plant Science · Genetics
Research interest
Research interests include Genetics and Plant Breeding, Genetic Mapping and Diversity in Plants and Animals, Genetic and phenotypic traits in livestock, and Wheat and Barley Genetics and Pathology.
h-index
71
citations
24,012
works
366
NIH funding
primary concept
email

Recent publications

A pangenome and pantranscriptome of hexaploid oat
Nature 2025cited by 7position: middledoi
Field trial analyses of wheat and cassava benefit from spatial correction
2025cited by 0position: lastdoi
GrainGenes: a data-rich repository for small grains genetics and genomics
Database 2022cited by 92position: middledoi
Breedbase: a digital ecosystem for modern plant breeding
G3 Genes Genomes Genetics 2022cited by 71position: middledoi
Exploring genotype by environment interaction on cassava yield and yield related traits using classical statistical methods
PLoS ONE 2022cited by 36position: lastdoi
Response to Early Generation Genomic Selection for Yield in Wheat
Frontiers in Plant Science 2022cited by 34position: middledoi
Parsimonious genotype by environment interaction covariance models for cassava (Manihot esculenta)
Frontiers in Plant Science 2022cited by 17position: middledoi
Increasing cassava root yield: Additive-dominant genetic models for selection of parents and clones
Frontiers in Plant Science 2022cited by 14position: middledoi
Genomic mating in outbred species: predicting cross usefulness with additive and total genetic covariance matrices
Genetics 2021cited by 54position: lastdoi
Multi-omics prediction of oat agronomic and seed nutritional traits across environments and in distantly related populations
Theoretical and Applied Genetics 2021cited by 48position: lastdoi
Data-driven decentralized breeding increases prediction accuracy in a challenging crop production environment
Communications Biology 2021cited by 45position: middledoi
Development of the Wheat Practical Haplotype Graph database as a resource for genotyping data storage and genotype imputation
G3 Genes Genomes Genetics 2021cited by 27position: middledoi
Development of the Wheat Practical Haplotype Graph Database as a Resource for Genotyping Data Storage and Genotype Imputation
bioRxiv (Cold Spring Harbor Laboratory) 2021cited by 7position: middledoi
Genome-wide association analysis reveals new insights into the genetic architecture of defensive, agro-morphological and quality-related traits in cassava
Plant Molecular Biology 2020cited by 69position: middledoi
High-throughput phenotyping platforms enhance genomic selection for wheat grain yield across populations and cycles in early stage
Theoretical and Applied Genetics 2019cited by 105position: middledoi
OUP accepted manuscript
Database 2019cited by 65position: middledoi
Heritable temporal gene expression patterns correlate with metabolomic seed content in developing hexaploid oat seed
Plant Biotechnology Journal 2019cited by 59position: lastdoi
Multivariate Genome-Wide Association Analyses Reveal the Genetic Basis of Seed Fatty Acid Composition in Oat ( <i>Avena sativa</i> L.)
G3 Genes Genomes Genetics 2019cited by 57position: middledoi
Genome-wide association mapping and genomic prediction for CBSD resistance in Manihot esculenta
Scientific Reports 2018cited by 88position: lastdoi
Genome‐Wide Association Study of Resistance to Cassava Green Mite Pest and Related Traits in Cassava
Crop Science 2018cited by 42position: middledoi
Multitrait, Random Regression, or Simple Repeatability Model in High‐Throughput Phenotyping Data Improve Genomic Prediction for Wheat Grain Yield
The Plant Genome 2017cited by 198position: middledoi
Prospects for Genomic Selection in Cassava Breeding
The Plant Genome 2017cited by 140position: lastdoi
Genome‐Wide Association Mapping of Correlated Traits in Cassava: Dry Matter and Total Carotenoid Content
The Plant Genome 2017cited by 91position: middledoi
Whole-genome prediction of reaction norms to environmental stress in bread wheat (Triticum aestivum L.) by genomic random regression
Field Crops Research 2017cited by 86position: middledoi
Accuracies of univariate and multivariate genomic prediction models in African cassava
Genetics Selection Evolution 2017cited by 70position: lastdoi
Rapid analyses of dry matter content and carotenoids in fresh cassava roots using a portable visible and near infrared spectrometer (Vis/NIRS)
PLoS ONE 2017cited by 63position: lastdoi
Introduction to a Special Issue on Genotype by Environment Interaction
Crop Science 2016cited by 157position: middledoi
Genome-Enabled Prediction Models for Yield Related Traits in Chickpea
Frontiers in Plant Science 2016cited by 147position: middledoi
Genome‐Wide Association and Prediction Reveals Genetic Architecture of Cassava Mosaic Disease Resistance and Prospects for Rapid Genetic Improvement
The Plant Genome 2016cited by 144position: lastdoi
Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines
PLoS Genetics 2015cited by 605position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Mark E. Sorrells · Cornell University23 papers (2012–2025)Jesse Poland · Saint Louis University15 papers (2012–2022) · 11 papers (2013–2022)Jessica Rutkoski · University of Illinois Urbana-Champaign10 papers (2012–2025)Peter Kulakow · University of Florida10 papers (2013–2022)Marnin Wolfe · Cornell University9 papers (2016–2022) · 9 papers (2012–2022)Chiedozie Egesi · National Root Crops Research Institute8 papers (2016–2025)Nicolas Heslot · Limagrain (France)6 papers (2013–2014)Jeffrey B. Endelman · University of Wisconsin–Madison6 papers (2012–2015)Ravi P. Singh · Adani Institute of Infrastructure Engineering5 papers (2014–2019)Deniz Akdemir · National Marrow Donor Program5 papers (2013–2017) · 5 papers (2017–2022)Dunia Pino Del Carpio · La Sierra University4 papers (2016–2018)Julio Huerta‐Espino · Huazhong Agricultural University4 papers (2014–2019)Roberto Lozano · Ginkgo Bioworks, Inc. (United States)4 papers (2015–2018) · 4 papers (2012–2022)G. N. Atlin · Gates Foundation3 papers (2012–2015)John M. Hickey · Duke University3 papers (2012–2016)Moshood A. Bakare · Cornell University3 papers (2013–2022)