Area of research
Molecular Biology · Genetics
Research interest
Research interests include Microbial Metabolic Engineering and Bioproduction, Gene Regulatory Network Analysis, Bioinformatics and Genomic Networks, and Protein Structure and Dynamics.
RBAtools: a programming interface for Resource Balance Analysis models
SBML Level 3: an extensible format for the exchange and reuse of biological models
Automated generation of bacterial resource allocation models
Parameter balancing: consistent parameter sets for kinetic metabolic models
Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro <i>k</i> <sub>cat</sub> measurements
Toward Community Standards and Software for Whole-Cell Modeling
SBtab: a flexible table format for data exchange in systems biology
Spanning high-dimensional expression space using ribosome-binding site combinatorics
Systematic Construction of Kinetic Models from Genome-Scale Metabolic Networks
Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in <i>Bacillus subtilis</i>
Propagating semantic information in biochemical network models