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Zhichao Miao

European Bioinformatics Institute · GB
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Area of research
Molecular Biology · Immunology
Research interest
Research interests include Biology, Computational biology, RNA, Ribozyme, Nucleic acid structure, and Riboswitch.
h-index
citations
2,091
works
19
NIH funding
primary concept
email

Recent publications

Template-based RNA structure prediction advanced through a blind code competition
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 2position: middledoi
scDenorm: a denormalisation tool for integrating single-cell transcriptomics data
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 1position: lastdoi
A brain cell atlas integrating single-cell transcriptomes across human brain regions
Nature Medicine 2024cited by 85position: lastdoi
RNA-Puzzles Round V: blind predictions of 23 RNA structures
Nature Methods 2024cited by 59position: lastdoi
CTCF mutation at R567 causes developmental disorders via 3D genome rearrangement and abnormal neurodevelopment
Nature Communications 2024cited by 10position: middledoi
A pleiotropic recurrent dominant <i>ITPR3</i> variant causes a complex multisystemic disease
Science Advances 2024cited by 5position: middledoi
Alleviating batch effects in cell type deconvolution with SCCAF-D
Nature Communications 2024cited by 5position: lastdoi
Assessment of three‐dimensional RNA structure prediction in CASP15
Proteins Structure Function and Bioinformatics 2023cited by 148position: middledoi
Ribocentre-switch: a database of riboswitches
Nucleic Acids Research 2023cited by 24position: middledoi
Single-cell transcriptomics of adult macaque hippocampus reveals neural precursor cell populations
Nature Neuroscience 2022cited by 90position: middledoi
Identification of visual cortex cell types and species differences using single-cell RNA sequencing
Nature Communications 2022cited by 58position: middledoi
Linking transcriptomes with morphological and functional phenotypes in mammalian retinal ganglion cells
Cell Reports 2022cited by 52position: middledoi
Mapping Rora expression in resting and activated CD4+ T cells
PLoS ONE 2021cited by 43position: middledoi
RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers
RNA 2020cited by 172position: firstdoi
<i>NCKAP1L</i>defects lead to a novel syndrome combining immunodeficiency, lymphoproliferation, and hyperinflammation
The Journal of Experimental Medicine 2020cited by 86position: middledoi
Longevity, clonal relationship, and transcriptional program of celiac disease–specific plasma cells
The Journal of Experimental Medicine 2020cited by 47position: middledoi
Decoding human fetal liver haematopoiesis
Nature 2019cited by 630position: middledoi
AbRSA: A robust tool for antibody numbering
Protein Science 2019cited by 65position: middledoi
RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme
RNA 2017cited by 205position: firstdoi
Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond–like features
Journal of Clinical Investigation 2017cited by 172position: middledoi
<i>RNA-Puzzles</i> Round II: assessment of RNA structure prediction programs applied to three large RNA structures
RNA 2015cited by 207position: firstdoi

Grants

No grants ingested yet.

Frequent collaborators

Sheng Liu · Indiana University Health4 papers (2022–2024)Nana Xu · Ministry of Education4 papers (2022–2024)Zhao-Zhe Hao · Fourth Affiliated Hospital of China Medical University4 papers (2022–2024)Lei Tang · Guiyang Medical University3 papers (2022–2022) · 3 papers (2024–2025)Ruifeng Liu · Chinese Academy of Sciences3 papers (2022–2022)Yuhui Shen · Ruijin Hospital3 papers (2022–2022)Fan Bu · South China Agricultural University2 papers (2023–2023)Xialin Liu · Sun Yat-sen University2 papers (2022–2022)Chuan Xu · Trinity College2 papers (2022–2022)Alvis Brāzma · European Bioinformatics Institute2 papers (2024–2025)Ziliang Huang · University of Southern California2 papers (2024–2024)Yizhi Liu · Hunan University of Science and Technology2 papers (2022–2022)Yongjian Zhang · Shandong University2 papers (2024–2025)Wanjing Huang · Sun Yat-sen University2 papers (2022–2022)Jia-Ru Wei · Fujian Normal University2 papers (2022–2022)Mengyao Huang · Zhejiang University of Science and Technology2 papers (2022–2022)Irene Papatheodorou · European Bioinformatics Institute2 papers (2024–2025)Sarah A. Teichmann · Stem Cell Institute2 papers (2021–2022)Anna Vathrakokoili Pournara · Wellcome Sanger Institute2 papers (2024–2025)
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