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Joël Doré

AgroParisTech ·
Area of research
Molecular Biology · Food Science
Research interest
Research interests include Gut microbiota and health, Probiotics and Fermented Foods, Clostridium difficile and Clostridium perfringens research, and Diet and metabolism studies.
h-index
100
citations
79,119
works
495
NIH funding
primary concept
Medicine
email

Recent publications

International consensus statement on microbiome testing in clinical practice
˜The œLancet. Gastroenterology & hepatology 2024cited by 70position: middledoi
Multifunctional dietary approach reduces intestinal inflammation in relation with changes in gut microbiota composition in subjects at cardiometabolic risk: the SINFONI project
Gut Microbes 2024cited by 20position: middledoi
CT-200 A Multicentre, Randomized, Double-Blinded, Phase 2b Study Evaluating The Efficacy And Safety Of Maat033 an Oral, Pooled Microbiome Ecosystem Therapy In Patients Undergoing Allogenic Hematopoietic Cell Transplantation to Improve Overall Survival: the PHOEBUS trial
Clinical Lymphoma Myeloma & Leukemia 2024cited by 0position: middledoi
Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies
Nature 2023cited by 348position: middledoi
Single-Donor and Pooling Strategies for Fecal Microbiota Transfer Product Preparation in Ulcerative Colitis: A Systematic Review and Meta-analysis
Clinical and Translational Gastroenterology 2023cited by 28position: middledoi
Increasing the diversity of dietary fibers in a daily-consumed bread modifies gut microbiota and metabolic profile in subjects at cardiometabolic risk
Gut Microbes 2022cited by 69position: middledoi
Microbial ecology perturbation in human IgA deficiency
Science Translational Medicine 2018cited by 269position: middledoi
Prediction of the intestinal resistome by a three-dimensional structure-based method
Nature Microbiology 2018cited by 216position: middledoi
Towards standards for human fecal sample processing in metagenomic studies
Nature Biotechnology 2017cited by 889position: middledoi
Health relevance of the modification of low grade inflammation in ageing (inflammageing) and the role of nutrition
Ageing Research Reviews 2017cited by 473position: middledoi
Enteric Delivery of Regenerating Family Member 3 alpha Alters the Intestinal Microbiota and Controls Inflammation in Mice With Colitis
Gastroenterology 2017cited by 151position: middledoi
Commensal gut bacteria modulate phosphorylation-dependent PPARγ transcriptional activity in human intestinal epithelial cells
Scientific Reports 2017cited by 97position: middledoi
Human gut microbes impact host serum metabolome and insulin sensitivity
Nature 2016cited by 2,118position: middledoi
A reference gene catalogue of the pig gut microbiome
Nature Microbiology 2016cited by 592position: middledoi
Ecological robustness of the gut microbiota in response to ingestion of transient food-borne microbes
The ISME Journal 2016cited by 258position: middledoi
Transcriptional interactions suggest niche segregation among microorganisms in the human gut
Nature Microbiology 2016cited by 64position: middledoi
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
Nature 2015cited by 2,087position: middledoi
<i>Akkermansia muciniphila</i> and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology
Gut 2015cited by 1,867position: middledoi
A catalog of the mouse gut metagenome
Nature Biotechnology 2015cited by 533position: middledoi
Dietary Modulation of Gut Microbiota Contributes to Alleviation of Both Genetic and Simple Obesity in Children
EBioMedicine 2015cited by 416position: middledoi
An integrated catalog of reference genes in the human gut microbiome
Nature Biotechnology 2014cited by 2,222position: middledoi
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
Nature Biotechnology 2014cited by 1,302position: middledoi
Richness of human gut microbiome correlates with metabolic markers
Nature 2013cited by 4,734position: middledoi
The Intestinal Microbiota Modulates the Anticancer Immune Effects of Cyclophosphamide
Science 2013cited by 1,985position: middledoi
Metagenomic species profiling using universal phylogenetic marker genes
Nature Methods 2013cited by 540position: middledoi
Probiotics, prebiotics, and the host microbiome: the science of translation
Annals of the New York Academy of Sciences 2013cited by 124position: middledoi
ANGPTL4 expression induced by butyrate and rosiglitazone in human intestinal epithelial cells utilizes independent pathways
American Journal of Physiology-Gastrointestinal and Liver Physiology 2013cited by 88position: middledoi
Translating the human microbiome
Nature Biotechnology 2013cited by 32position: middledoi
A metagenomic insight into our gut's microbiome
Gut 2012cited by 365position: lastdoi
Butyrate Produced by Commensal Bacteria Potentiates Phorbol Esters Induced AP-1 Response in Human Intestinal Epithelial Cells
PLoS ONE 2012cited by 82position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

· 4 papers (2015–2016)Edi Prifti · Inserm3 papers (2015–2016)Oluf Pedersen · European Molecular Biology Laboratory3 papers (2013–2016) · 3 papers (2013–2024)Peer Bork · European Bioinformatics Institute3 papers (2013–2016) · 3 papers (2012–2017)Junhua Li · BGI Group (China)3 papers (2013–2016)Jeroen Raes · KU Leuven3 papers (2012–2015)Julie‐Anne Nazare · Université Claude Bernard Lyon 12 papers (2022–2024) · 2 papers (2022–2024)Willem M. de Vos · University of Helsinki2 papers (2013–2013)Manimozhiyan Arumugam · Odense University Hospital2 papers (2013–2015)S. Dusko Ehrlich · Queen Mary University of London2 papers (2013–2016) · 2 papers (2013–2017)Jens Roat Kultima · European Bioinformatics Institute2 papers (2013–2015)Torben Hansen · Novo Nordisk Foundation2 papers (2015–2016)Velmurugesan Arulampalam · Karolinska Institutet2 papers (2013–2017) · 2 papers (2012–2017)Jun Wang · 458th Hospital PLA2 papers (2013–2015)Torben Jørgensen · Danish Ministry of Climate, Energy and Utilities2 papers (2015–2016)