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Ramesh A. Shivdasani

Boston Medical Center · US
Area of research
Molecular Biology · Genetics
Research interest
Research interests include Biology, Cell biology, Stem cell, Wnt signaling pathway, Transcription factor, and Enhancer.
h-index
citations
4,508
works
26
NIH funding
primary concept
email

Recent publications

Niche-driven phenotypic plasticity and cis-regulatory dynamics of a revised model for intestinal secretory differentiation
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 0position: lastdoi
Short-term post-fast refeeding enhances intestinal stemness via polyamines
Nature 2024cited by 51position: middledoi
Graded BMP signaling within intestinal crypt architecture directs self-organization of the Wnt-secreting stem cell niche
Cell stem cell 2023cited by 87position: lastdoi
Role of PDGFRA+ cells and a CD55+ PDGFRALo fraction in the gastric mesenchymal niche
Nature Communications 2023cited by 16position: lastdoi
SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling
Cell stem cell 2021cited by 70position: middledoi
Creb5 establishes the competence for Prg4 expression in articular cartilage
Communications Biology 2021cited by 59position: middledoi
Distinct Mesenchymal Cell Populations Generate the Essential Intestinal BMP Signaling Gradient
Cell stem cell 2020cited by 360position: lastdoi
Ascl2-Dependent Cell Dedifferentiation Drives Regeneration of Ablated Intestinal Stem Cells
Cell stem cell 2020cited by 246position: lastdoi
Creb5 establishes the competence for <i>Prg4</i> expression in articular cartilage
bioRxiv (Cold Spring Harbor Laboratory) 2020cited by 0position: middledoi
Enhancer signatures stratify and predict outcomes of non-functional pancreatic neuroendocrine tumors
Nature Medicine 2019cited by 184position: lastdoi
Extensive Recovery of Embryonic Enhancer and Gene Memory Stored in Hypomethylated Enhancer DNA
Molecular Cell 2019cited by 87position: lastdoi
Publisher Correction: Enhancer signatures stratify and predict outcomes of non-functional pancreatic neuroendocrine tumors
Nature Medicine 2019cited by 5position: lastdoi
Challenges and emerging directions in single-cell analysis
Genome biology 2017cited by 362position: middledoi
Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells
Cell stem cell 2017cited by 282position: lastdoi
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice
Nature Genetics 2016cited by 376position: middledoi
Acquired Tissue-Specific Promoter Bivalency Is a Basis for PRC2 Necessity in Adult Cells
Cell 2016cited by 146position: lastdoi
Single-Cell Transcript Profiles Reveal Multilineage Priming in Early Progenitors Derived from Lgr5+ Intestinal Stem Cells
Cell Reports 2016cited by 79position: lastdoi
Sox2 Suppresses Gastric Tumorigenesis in Mice
Cell Reports 2016cited by 75position: middledoi
The androgen receptor cistrome is extensively reprogrammed in human prostate tumorigenesis
Nature Genetics 2015cited by 486position: middledoi
The use of murine‐derived fundic organoids in studies of gastric physiology
The Journal of Physiology 2015cited by 114position: middledoi
Dissecting Engineered Cell Types and Enhancing Cell Fate Conversion via CellNet
Cell 2014cited by 289position: middledoi
Broadly permissive intestinal chromatin underlies lateral inhibition and cell plasticity
Nature 2014cited by 263position: lastdoi
Wnt Secretion from Epithelial Cells and Subepithelial Myofibroblasts Is Not Required in the Mouse Intestinal Stem Cell Niche In Vivo
Stem Cell Reports 2014cited by 113position: lastdoi
Gastrointestinal Adenocarcinomas of the Esophagus, Stomach, and Colon Exhibit Distinct Patterns of Genome Instability and Oncogenesis
Cancer Research 2012cited by 275position: middledoi
Intact function of Lgr5 receptor-expressing intestinal stem cells in the absence of Paneth cells
Proceedings of the National Academy of Sciences 2012cited by 242position: lastdoi
Targeted Disruption of the BCL9/β-Catenin Complex Inhibits Oncogenic Wnt Signaling
Science Translational Medicine 2012cited by 241position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

· 7 papers (2016–2021)Shariq Madha · Brigham and Women's Hospital5 papers (2019–2023)Stuart H. Orkin · Boston Children's Hospital5 papers (2016–2023)Guo‐Cheng Yuan · Tisch Hospital5 papers (2016–2020)Assieh Saadatpour · Johnson & Johnson (United States)4 papers (2016–2020)Ermanno Malagola · Columbia University3 papers (2023–2025)Tae‐Hee Kim · Pukyong National University3 papers (2012–2016)Nicholas K. O’Neill · Boston University3 papers (2016–2019)Madhurima Saxena · Harvard Stem Cell Institute3 papers (2016–2017) · 3 papers (2016–2020) · 3 papers (2014–2016)Judith Kraiczy · Harvard University3 papers (2021–2025)Neil McCarthy · The University of Texas at Austin3 papers (2020–2023)Yao Gao · Nanchang University2 papers (2020–2021)Henry W. Long · Harvard University2 papers (2014–2015)Kristina M. Holton · Harvard Stem Cell Institute2 papers (2020–2021) · 2 papers (2014–2016)Kushal K. Banerjee · Harvard Stem Cell Institute2 papers (2019–2021)Guodong Tie · University of Massachusetts Chan Medical School2 papers (2023–2023)Zachary T. Herbert · European Molecular Biology Laboratory2 papers (2017–2019)