Jean−Fred Fontaine

Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

Batch effect detection and correction in RNA-seq data using machine-learning-based automated assessment of quality

Annotation and Analysis of 3902 Odorant Receptor Protein Sequences from 21 Insect Species Provide Insights into the Evolution of Odorant Receptor Gene Families in Solitary and Social Insects

seqQscorer: automated quality control of next-generation sequencing data using machine learning

Statistical guidelines for quality control of next-generation sequencing techniques

LipiDisease: associate lipids to diseases using literature mining

Posttranslational modifications by ADAM10 shape myeloid antigen-presenting cell homeostasis in the splenic marginal zone

Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains

RNA Sequencing of Human Peripheral Blood Cells Indicates Upregulation of Immune-Related Genes in Huntington's Disease

Computational identification of cell-specific variable regions in ChIP-seq data

Defining Human Tyrosine Kinase Phosphorylation Networks Using Yeast as an In Vivo Model Substrate

Evaluation of in vivo and in vitro models of toxicity by comparison of toxicogenomics data with the literature

Gene Set to Diseases (GS2D): disease enrichment analysis on human gene sets with literature data

Preliminary evaluation of the CellFinder literature curation pipeline for gene expression in kidney cells and anatomical parts

CELDA - an ontology for the comprehensive representation of cells in complex systems

HIPPIE: Integrating Protein Interaction Networks with Experiment Based Quality Scores