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Emiley A. Eloe‐Fadrosh

United States Department of Energy ·
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Area of research
Ecology · Molecular Biology
Research interest
Research interests include Microbial Community Ecology and Physiology, Genomics and Phylogenetic Studies, Bacteriophages and microbial interactions, and Gut microbiota and health.
h-index
55
citations
18,104
works
210
NIH funding
primary concept
Metagenomics
email

Recent publications

Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
Nature Communications 2025cited by 6position: middledoi
Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
Systematic and Applied Microbiology 2025cited by 3position: middledoi
High fat intake sustains sorbitol intolerance after antibiotic-mediated Clostridia depletion from the gut microbiota
Cell 2024cited by 49position: middledoi
A concept for international societally relevant microbiology education and microbiology knowledge promulgation in society
Microbial Biotechnology 2024cited by 33position: middledoi
From soil to sequence: filling the critical gap in genome-resolved metagenomics is essential to the future of soil microbial ecology
Environmental Microbiome 2024cited by 33position: middledoi
Unraveling the functional dark matter through global metagenomics
Nature 2023cited by 192position: middledoi
IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
Nucleic Acids Research 2023cited by 87position: middledoi
Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
Astrobiology 2023cited by 6position: middledoi
Microbes and Climate Change: a Research Prospectus for the Future
mBio 2022cited by 187position: middledoi
Ecology and molecular targets of hypermutation in the global microbiome
Nature Communications 2021cited by 84position: lastdoi
Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative’s Workshop and Follow-On Activities
mSystems 2021cited by 72position: lastdoi
Correction for Vangay et al., “Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative’s Workshop and Follow-On Activities”
mSystems 2021cited by 8position: lastdoi
Giant virus diversity and host interactions through global metagenomics
Nature 2020cited by 388position: middledoi
COVID-19 pandemic reveals the peril of ignoring metadata standards
Scientific Data 2020cited by 101position: middledoi
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
Nature Microbiology 2019cited by 308position: lastdoi
Triplicate PCR Reactions for 16S rRNA Gene Amplicon Sequencing are Unnecessary
BioTechniques 2019cited by 97position: middledoi
Expansion of <i>Thaumarchaeota</i> habitat range is correlated with horizontal transfer of ATPase operons
The ISME Journal 2019cited by 89position: middledoi
Minimum Information about an Uncultivated Virus Genome (MIUViG)
Nature Biotechnology 2018cited by 778position: lastdoi
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
Nature Biotechnology 2018cited by 662position: middledoi
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
Nature Biotechnology 2017cited by 2,668position: middledoi
Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota
The ISME Journal 2017cited by 137position: middledoi
Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs
Nature Communications 2016cited by 153position: firstdoi
Aerosol Mycobacterium tuberculosis Infection Causes Rapid Loss of Diversity in Gut Microbiota
PLoS ONE 2014cited by 134position: middledoi
Ecotype Diversity and Conversion in Photobacterium profundum Strains
PLoS ONE 2014cited by 23position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Tanja Woyke · Lawrence Berkeley National Laboratory6 papers (2016–2023)Nikos C. Kyrpides · Lawrence Berkeley National Laboratory6 papers (2016–2023)Natalia Ivanova · Lawrence Berkeley National Laboratory4 papers (2016–2023)Simon Roux · Lawrence Berkeley National Laboratory4 papers (2019–2023)David Páez-Espino · Regione Siciliana3 papers (2016–2020)Stephen Nayfach · Bio-Medical Science (South Korea)3 papers (2019–2023)Frederik Schulz · Lawrence Berkeley National Laboratory2 papers (2019–2020)Lynn M. Schriml · Johns Hopkins Medicine2 papers (2020–2023)Edward M. Rubin · Lawrence Berkeley National Laboratory2 papers (2016–2018)Jennifer Pett‐Ridge · Lawrence Berkeley National Laboratory2 papers (2016–2024)Graeme T. Attwood · AgResearch2 papers (2018–2021)Scott Tighe · University of Vermont2 papers (2020–2023)Douglas H. Bartlett · Scripps Institution of Oceanography2 papers (2014–2019)Claire M. Fraser · Human Genome Sciences (United States)1 papers (2014–2014) · 1 papers (2017–2017) · 1 papers (2023–2023)William Rodriguez-Reillo · University of Massachusetts Amherst1 papers (2024–2024)Bernard Henrissat · Centre National de la Recherche Scientifique1 papers (2018–2018)Junbin Ji · Nanjing Agricultural University1 papers (2019–2019)Christopher J. Creevey · European Molecular Biology Laboratory1 papers (2018–2018)
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