← back to search

Shai S. Shen-Orr

Technion – Israel Institute of Technology · IL
Area of research
Molecular Biology · Immunology
Research interest
Research interests include Single-cell and spatial transcriptomics, Immune Cell Function and Interaction, CAR-T cell therapy research, and Influenza Virus Research Studies.
h-index
38
citations
23,093
works
136
NIH funding
primary concept
Medicine
email

Recent publications

A human-mouse atlas of intrarenal myeloid cells identifies conserved disease-associated macrophages in lupus nephritis
The Journal of Experimental Medicine 2025cited by 10position: middledoi
Cytokine Regulation of Human Antibody Responses to Influenza Vaccines
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 0position: middledoi
B cell-derived cfDNA after primary BNT162b2 mRNA vaccination anticipates memory B cells and SARS-CoV-2 neutralizing antibodies
Med 2022cited by 10position: middledoi
An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging
Nature Aging 2021cited by 572position: middledoi
Antibiotic use differentially affects the risk of anti-drug antibody formation during anti-TNFα therapy in inflammatory bowel disease patients: a report from the epi-IIRN
Gut 2021cited by 26position: middledoi
Author Correction: An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging
Nature Aging 2021cited by 8position: middledoi
Alignment of single-cell trajectories by tuMap enables high-resolution quantitative comparison of cancer samples
Cell Systems 2021cited by 8position: lastdoi
A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring
Nature Medicine 2019cited by 530position: lastdoi
UVB-Induced Tumor Heterogeneity Diminishes Immune Response in Melanoma
Cell 2019cited by 393position: middledoi
Simulation of single-protein nanopore sensing shows feasibility for whole-proteome identification
PLoS Computational Biology 2019cited by 61position: middledoi
Pregnancy-Induced Alterations in NK Cell Phenotype and Function
Frontiers in Immunology 2019cited by 52position: middledoi
ImmPort, toward repurposing of open access immunological assay data for translational and clinical research
Scientific Data 2018cited by 868position: middledoi
Ulcerative colitis mucosal transcriptomes reveal mitochondriopathy and personalized mechanisms underlying disease severity and treatment response
Nature Communications 2018cited by 380position: middledoi
UV-Protection Timer Controls Linkage between Stress and Pigmentation Skin Protection Systems
Molecular Cell 2018cited by 46position: middledoi
CD38 contributes to human natural killer cell responses through a role in immune synapse formation
bioRxiv (Cold Spring Harbor Laboratory) 2018cited by 19position: middledoi
Multicohort analysis reveals baseline transcriptional predictors of influenza vaccination responses
Science Immunology 2017cited by 165position: middledoi
A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure
Cell Systems 2016cited by 1,743position: middledoi
Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans
Cell Systems 2016cited by 150position: firstdoi
A c-Myc/miR17-92/Pten Axis Controls PI3K-Mediated Positive and Negative Selection in B Cell Development and Reconstitutes CD19 Deficiency
Cell Reports 2016cited by 49position: middledoi
Variation in the Human Immune System Is Largely Driven by Non-Heritable Influences
Cell 2015cited by 1,094position: middledoi
Glycolysis-Mediated Changes in Acetyl-CoA and Histone Acetylation Control the Early Differentiation of Embryonic Stem Cells
Cell Metabolism 2015cited by 668position: middledoi
Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures
Immunity 2015cited by 342position: middledoi
Cytomegalovirus infection enhances the immune response to influenza
Science Translational Medicine 2015cited by 337position: middledoi
Systems Immunology Reveals Markers of Susceptibility to West Nile Virus Infection
Clinical and Vaccine Immunology 2014cited by 36position: middledoi
Apoptosis and other immune biomarkers predict influenza vaccine responsiveness
Molecular Systems Biology 2013cited by 188position: middledoi
Significance analysis of xMap cytokine bead arrays
Proceedings of the National Academy of Sciences 2012cited by 35position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Mark M. Davis · Case Western Reserve University8 papers (2012–2019)Cornelia L. Dekker · Palo Alto University7 papers (2013–2019)David Furman · Buck Institute for Research on Aging5 papers (2013–2019)Holden T. Maecker · Stanford University5 papers (2013–2019)Renaud Gaujoux · University of Cape Town5 papers (2014–2019)Elina Starosvetsky · University of Illinois Urbana-Champaign4 papers (2018–2021)Gary E. Swan · SRI International3 papers (2015–2019)Purvesh Khatri · Stanford University3 papers (2018–2019)Vladimir Jojic · Kyocera (United States)3 papers (2013–2015) · 3 papers (2018–2021)Atul J. Butte · UCSF Helen Diller Family Comprehensive Cancer Center3 papers (2015–2018)Brian Kidd · Research Triangle Park Foundation3 papers (2013–2016)Christof Seiler · Palo Alto University2 papers (2018–2019)Cesar J. Lopez Angel · Duke Medical Center2 papers (2015–2015)Catherine A. Blish · Stanford University2 papers (2018–2019)Sanchita Bhattacharya · University of California, San Francisco2 papers (2015–2018)Natali Aziz · Palo Alto University2 papers (2018–2019)Mathieu Le Gars · Human Vaccines Project Europe2 papers (2018–2019)Susan Holmes · Stanford University2 papers (2018–2019) · 2 papers (2016–2019)