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Darren P. Martin

University of Cape Town · ZA
Area of research
Plant Science · Endocrinology
Research interest
Research interests include Plant Virus Research Studies, Plant and Fungal Interactions Research, Animal Virus Infections Studies, and SARS-CoV-2 and COVID-19 Research.
h-index
77
citations
35,199
works
394
NIH funding
primary concept
Biology
email

Recent publications

Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025
Journal of General Virology 2025cited by 6position: middledoi
Identification and genomic characterisation of BA.3.2: a highly divergent BA.3-related SARS-CoV-2 lineage from southern Africa
medRxiv 2025cited by 4position: middledoi
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa
Nature 2022cited by 1,889position: middledoi
Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa
Nature Medicine 2022cited by 694position: middledoi
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance
Science 2022cited by 174position: middledoi
Exploring the Natural Origins of SARS-CoV-2 in the Light of Recombination
Genome Biology and Evolution 2022cited by 164position: middledoi
Selection Analysis Identifies Clusters of Unusual Mutational Changes in Omicron Lineage BA.1 That Likely Impact Spike Function
Molecular Biology and Evolution 2022cited by 120position: firstdoi
Neutralisation sensitivity of the SARS-CoV-2 omicron (B.1.1.529) variant: a cross-sectional study
The Lancet Infectious Diseases 2022cited by 93position: middledoi
Detection of SARS-CoV-2 intra-host recombination during superinfection with Alpha and Epsilon variants in New York City
Nature Communications 2022cited by 46position: middledoi
Detection of a SARS-CoV-2 variant of concern in South Africa
Nature 2021cited by 1,824position: middledoi
Omicron extensively but incompletely escapes Pfizer BNT162b2 neutralization
Nature 2021cited by 1,189position: middledoi
The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages
Cell 2021cited by 274position: firstdoi
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa
Science 2021cited by 234position: middledoi
Exploring the natural origins of SARS-CoV-2 in the light of recombination
bioRxiv (Cold Spring Harbor Laboratory) 2021cited by 50position: middledoi
Complex evolutionary history of felid anelloviruses
Virology 2021cited by 25position: middledoi
A novel lineage of polyomaviruses identified in bark scorpions
Virology 2021cited by 17position: middledoi
RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets
Virus Evolution 2020cited by 670position: firstdoi
Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable
Proceedings of the National Academy of Sciences 2020cited by 81position: middledoi
A Novel Divergent Geminivirus Identified in Asymptomatic New World Cactaceae Plants
Viruses 2020cited by 24position: middledoi
ICTV Virus Taxonomy Profile: Geminiviridae
Journal of General Virology 2017cited by 842position: middledoi
Capulavirus and Grablovirus: two new genera in the family Geminiviridae
Archives of Virology 2017cited by 250position: lastdoi
RDP4: Detection and analysis of recombination patterns in virus genomes
Virus Evolution 2015cited by 3,411position: firstdoi
Revision of Begomovirus taxonomy based on pairwise sequence comparisons
Archives of Virology 2015cited by 801position: middledoi
Gene-Wide Identification of Episodic Selection
Molecular Biology and Evolution 2015cited by 708position: middledoi
The global distribution of<i>Banana bunchy top virus</i>reveals little evidence for frequent recent, human-mediated long distance dispersal events
Virus Evolution 2015cited by 82position: middledoi
Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus
Archives of Virology 2014cited by 247position: lastdoi
Revisiting the classification of curtoviruses based on genome-wide pairwise identity
Archives of Virology 2014cited by 92position: middledoi
A genome-wide pairwise-identity-based proposal for the classification of viruses in the genus Mastrevirus (family Geminiviridae)
Archives of Virology 2013cited by 258position: middledoi
The Comparative Genomics of Human Respiratory Syncytial Virus Subgroups A and B: Genetic Variability and Molecular Evolutionary Dynamics
Journal of Virology 2013cited by 105position: middledoi
Molecular evolution of porcine reproductive and respiratory syndrome virus isolates from central China
Research in Veterinary Science 2013cited by 10position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Arvind Varsani · University of Cape Town11 papers (2013–2021) · 6 papers (2013–2017)F. Murilo Zerbini · Arizona State University6 papers (2013–2017) · 6 papers (2013–2017)A. M. Idris · University of Arizona5 papers (2014–2017)Sergei L. Kosakovsky Pond · Temple University5 papers (2015–2022)Ben Murrell · Karolinska Institutet5 papers (2015–2022) · 4 papers (2013–2017)Simona Kraberger · Colorado State University4 papers (2015–2021)Philippe Lemey · KU Leuven4 papers (2012–2021)Philippe Roumagnac · University of Cape Town4 papers (2017–2020) · 4 papers (2013–2017)Judith K. Brown · University of Arizona4 papers (2013–2015)Joel O. Wertheim · Instituto Nacional de Enfermedades Respiratorias3 papers (2015–2022)David L. Robertson · MRC University of Glasgow Centre for Virus Research3 papers (2021–2022)Koenraad Van Doorslaer · University of Arizona3 papers (2020–2021)Cecilia Hernández‐Zepeda · University of Arizona3 papers (2014–2015)Brejnev Muhire · University of Cape Town3 papers (2013–2015)Michael C. Lund · Arizona State University2 papers (2020–2021)Kara Schmidlin · Arizona State University2 papers (2020–2021)