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Paul Medvedev

Pennsylvania State University · US
Area of research
Molecular Biology · Artificial Intelligence
Research interest
Research interests include Genomics and Phylogenetic Studies, Algorithms and Data Compression, Chromosomal and Genetic Variations, and Gene expression and cancer classification.
h-index
36
citations
8,849
works
168
NIH funding
primary concept
Biology
email

Recent publications

The complete sequence and comparative analysis of ape sex chromosomes
Nature 2024cited by 122position: middledoi
The complete sequence of a human Y chromosome
Nature 2023cited by 445position: middledoi
Efficient mapping of accurate long reads in minimizer space with mapquik
Genome Research 2023cited by 17position: middledoi
Towards complete and error-free genome assemblies of all vertebrate species
Nature 2021cited by 3,000position: middledoi
Computational Pan-Genomics: Status, Promises and Challenges
bioRxiv (Cold Spring Harbor Laboratory) 2016cited by 151position: middledoi
Complexity of independent set reconfigurability problems
Theoretical Computer Science 2012cited by 141position: middledoi

Grants

A k-mer-based search engine for sequencing databases
NSF2138585$800,0002022–2027PIRePORTER
CAREER: De Novo Assembly of Large Genomic Data
NSF1453527$549,0102015–2022PIRePORTER
ABI Innovation: A Novel Framework for Detecting Genomic Structural Variation
NSF1356529$733,3162014–2018PIRePORTER

Frequent collaborators

Kristoffer Sahlin · Pennsylvania State University1 papers (2023–2023)Barış Ekim · Massachusetts Institute of Technology1 papers (2023–2023) · 1 papers (2012–2012) · 1 papers (2012–2012)Bonnie Berger · Broad Institute1 papers (2023–2023)Rayan Chikhi · Pennsylvania State University1 papers (2023–2023)