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Umut Yildiz

Heidelberg University · DE
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Area of research
Molecular Biology · Pulmonary and Respiratory Medicine
Research interest
Research interests include Single-cell and spatial transcriptomics, CRISPR and Genetic Engineering, Ferroptosis and cancer prognosis, and Genomics and Chromatin Dynamics.
h-index
11
citations
637
works
29
NIH funding
primary concept
email

Recent publications

Circulating tumor cell plasticity determines breast cancer therapy resistance via neuregulin 1–HER3 signaling
Nature Cancer 2025cited by 27position: middledoi
Functional phenotyping of genomic variants using joint multiomic single-cell DNA–RNA sequencing
Nature Methods 2025cited by 14position: middledoi
PRDX6 contributes to selenocysteine metabolism and ferroptosis resistance
Molecular Cell 2024cited by 69position: middledoi
HIPSD&R-seq enables scalable genomic copy number and transcriptome profiling
Genome biology 2024cited by 5position: middledoi
LRP8‐mediated selenocysteine uptake is a targetable vulnerability in MYCN‐amplified neuroblastoma
EMBO Molecular Medicine 2023cited by 73position: middledoi
Low level of antioxidant capacity biomarkers but not target overexpression predicts vulnerability to ROS-inducing drugs
Redox Biology 2023cited by 11position: middledoi
Low level of antioxidant capacity biomarkers but not target overexpression predicts vulnerability to ROS-inducing drugs
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 1position: middledoi
HIPSD&R-seq enables scalable genomic copy number and transcriptome profiling
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 1position: middledoi
MYCN mediates cysteine addiction and sensitizes neuroblastoma to ferroptosis
Nature Cancer 2022cited by 221position: middledoi
Selenocysteine metabolism is a targetable vulnerability in <i>MYCN</i> -amplified cancers
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 3position: middledoi
PAX8 activates metabolic genes via enhancer elements in Renal Cell Carcinoma
Nature Communications 2019cited by 69position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Kyung‐Min Noh · European Bioinformatics Institute3 papers (2023–2025)Oliver Stegle · Institut thématique Génétique, génomique et bioinformatique3 papers (2023–2025)Judith B. Zaugg · European Bioinformatics Institute3 papers (2023–2025)Mikael Marttinen · European Molecular Biology Laboratory3 papers (2023–2025)George Philippos · German Cancer Research Center2 papers (2023–2024)Milena Simovic-Lorenz · German Cancer Research Center2 papers (2023–2024)Albert P. Li · Cornell University2 papers (2023–2024)Aurélie Ernst · German Cancer Research Center2 papers (2023–2024)Olga Lazareva · German Cancer Research Center2 papers (2023–2024)Urja Parekh · German Cancer Research Center2 papers (2023–2024)Pooja Sant · German Cancer Research Center2 papers (2023–2024)Jan‐Philipp Mallm · German Cancer Research Center2 papers (2023–2024)Linda Hammann · German Cancer Research Center2 papers (2023–2024)Antonella F. M. Dost · Oncode Institute1 papers (2019–2019) · 1 papers (2025–2025)Rui Lopes · Novartis (Switzerland)1 papers (2019–2019)Valentina Cordo’ · Novartis (Switzerland)1 papers (2019–2019)Melusine Bleu · Novartis (Switzerland)1 papers (2019–2019)James E. Bradner · Novartis (China)1 papers (2019–2019)Audrey Kauffmann · Novartis (Switzerland)1 papers (2019–2019)
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