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J.A. Dunkle

Tennessee College of Applied Technology - Shelbyville · US
Area of research
Molecular Biology · Genetics
Research interest
Research interests include RNA and protein synthesis mechanisms, RNA modifications and cancer, Bacterial Genetics and Biotechnology, and Bacteriophages and microbial interactions.
h-index
17
citations
2,070
works
98
NIH funding
primary concept
email

Recent publications

A Role for Two Conserved Arginine Residues in Protected Persulfide Transfer by SufE-Dependent SufS Cysteine Desulfurases
Biochemistry 2025cited by 1position: middledoi
The structure of the SufS–SufE complex reveals interactions driving protected persulfide transfer in iron-sulfur cluster biogenesis
Journal of Biological Chemistry 2024cited by 7position: middledoi
The β-latch structural element of the SufS cysteine desulfurase mediates active site accessibility and SufE transpersulfurase positioning
Journal of Biological Chemistry 2023cited by 13position: middledoi
The structure of a Type III-A CRISPR-Cas effector complex reveals conserved and idiosyncratic contacts to target RNA and crRNA among Type III-A systems
PLoS ONE 2023cited by 9position: lastdoi
The effect of crRNA–target mismatches on cOA-mediated interference by a type III-A CRISPR-Cas system
RNA Biology 2022cited by 6position: lastdoi
The structure of a Type III-A CRISPR-Cas effector complex reveals conserved and idiosyncratic contacts to target RNA and crRNA among Type III-A systems
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 1position: lastdoi
Three critical regions of the erythromycin resistance methyltransferase, ErmE, are required for function supporting a model for the interaction of Erm family enzymes with substrate rRNA
RNA 2021cited by 6position: lastdoi
Shared requirements for key residues in the antibiotic resistance enzymes ErmC and ErmE suggest a common mode of RNA recognition
Journal of Biological Chemistry 2020cited by 15position: lastdoi
Structural evidence for a latch mechanism regulating access to the active site of SufS-family cysteine desulfurases
Acta Crystallographica Section D Structural Biology 2020cited by 13position: firstdoi
Regulation of cyclic oligoadenylate synthesis by the <i>Staphylococcus epidermidis</i> Cas10-Csm complex
RNA 2019cited by 46position: lastdoi
Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues
Journal of Biological Chemistry 2019cited by 40position: middledoi
Mechanism of tRNA-mediated +1 ribosomal frameshifting
Proceedings of the National Academy of Sciences 2018cited by 53position: middledoi
Structural Evidence for Dimer-Interface-Driven Regulation of the Type II Cysteine Desulfurase, SufS
Biochemistry 2018cited by 30position: firstdoi
E. coli cysteine desulfurase SufS E96A with a cysteine persulfide intermediate
2018cited by 14position: firstdoi
Molecular determinants for CRISPR RNA maturation in the Cas10–Csm complex and roles for non-Cas nucleases
Nucleic Acids Research 2016cited by 50position: middledoi
Defining the mRNA recognition signature of a bacterial toxin protein
Proceedings of the National Academy of Sciences 2015cited by 32position: middledoi
Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops
Proceedings of the National Academy of Sciences 2014cited by 71position: middledoi
Molecular recognition and modification of the 30S ribosome by the aminoglycoside-resistance methyltransferase NpmA
Proceedings of the National Academy of Sciences 2014cited by 60position: firstdoi
Reorganization of an intersubunit bridge induced by disparate 16S <i>ribosomal ambiguity</i> mutations mimics an EF-Tu-bound state
Proceedings of the National Academy of Sciences 2013cited by 35position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Patrick A. Frantom · The University of Texas at San Antonio7 papers (2018–2025)Mohamed Nasef · University of Alabama at Birmingham6 papers (2019–2023)C.M. Dunham · Emory Healthcare5 papers (2013–2018)Asma Hatoum-Aslan · University of Illinois Urbana-Champaign4 papers (2016–2023)Tatsuya Maehigashi · Johnson & Johnson (United States)4 papers (2013–2018) · 3 papers (2022–2023) · 3 papers (2018–2020)Stacey J. Miles · Emory Healthcare3 papers (2013–2015)Lucy Chou-Zheng · University of Illinois Urbana-Champaign3 papers (2016–2023) · 3 papers (2021–2023) · 3 papers (2023–2025) · 2 papers (2020–2021)Mohammadreza Paraan · Florida State University2 papers (2022–2023) · 2 papers (2016–2019)F. Wayne Outten · University of South Carolina2 papers (2018–2019) · 2 papers (2024–2025) · 2 papers (2023–2025)Scott M. Stagg · Florida State University2 papers (2022–2023) · 2 papers (2019–2020)Matthew Blahut · National Laboratory of the Rockies1 papers (2019–2019)