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Yu Lin

Chinese Academy of Sciences · CN
Area of research
Molecular Biology · Genetics
Research interest
Research interests include Genomics and Phylogenetic Studies, Genome Rearrangement Algorithms, Chromosomal and Genetic Variations, and Algorithms and Data Compression.
h-index
29
citations
9,549
works
142
NIH funding
primary concept
email

Recent publications

Quantitative metaproteomics reveals composition and metabolism characteristics of microbial communities in Chinese liquor fermentation starters
Frontiers in Microbiology 2023cited by 23position: middledoi
Metaproteomics profiling of the microbial communities in fermentation starters (Daqu) during multi-round production of Chinese liquor
Frontiers in Nutrition 2023cited by 19position: middledoi
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics
Nature Communications 2020cited by 246position: middledoi
Assembly of long, error-prone reads using repeat graphs
Nature Biotechnology 2019cited by 6,169position: middledoi
Victors: a web-based knowledge base of virulence factors in human and animal pathogens
Nucleic Acids Research 2018cited by 200position: middledoi
Direct MALDI-TOF MS Identification of Bacterial Mixtures
Analytical Chemistry 2018cited by 73position: middledoi
Assembly of long error-prone reads using de Bruijn graphs
Proceedings of the National Academy of Sciences 2016cited by 403position: firstdoi
MLGO: phylogeny reconstruction and ancestral inference from gene-order data
BMC Bioinformatics 2014cited by 117position: middledoi
An Exact Algorithm to Compute the Double-Cut-and-Join Distance for Genomes with Duplicate Genes
Journal of Computational Biology 2014cited by 98position: middledoi

Grants

Gravitational Instantons, Mirror Symmetry, and Enumerative Geometry
NSF2204109$157,6042022–2025PIRePORTER
RAPID: Countering COVID-19 Misinformation via Situation-Aware Visually Informed Treatment
NSF2027713$104,4912020–2022PIRePORTER
WORKSHOP: Doctoral Consortium for the International Conference on Social Computing, Behavioral-Cultural Modeling & Prediction and Behavior Representation in Modeling and Simulation
NSF1926691$20,0002019–2023PIRePORTER
EAGER: Thermal Laser: a new light source
NSF1840673$150,0002018–2021PIRePORTER
Collaborative Research: Collective Sense Making Following a Terrorist Attack: The Immediate and Long-Term Impact on Public Resilience
NSF1634944$181,0122016–2019PIRePORTER
GEM: Mode Conversion and Kinetic Alfven Waves at the Magnetopause and Their Effects in the Magnetosphere
NSF1405225$460,3672014–2018PIRePORTER
Gyrokinetic Electron and Fully Kinetic Ion Particle Simulation of Collisionless Magnetic Reconnection
NSF0903794$400,0002009–2013PIRePORTER
Realization of Photonic Band Gap Materials and Photonic Heterostructures By Innovative Material Growth
NSF0804581$376,2822008–2011PIRePORTER
A Three-Dimensional Global Hybrid Simulation Study of the Bow Shock and Its Interaction with the Dayside Magnetosphere
NSF0646442$250,2192007–2011PIRePORTER
Global Hybrid Simulations of the Bow Shock and Its Interaction with Interplanetary Discontinuities
NSF0213931$215,7072002–2006PIRePORTER
A Simulation Study for the Interaction of Interplanetary Discontinuities and Shock Waves with the Earth's Bow Shock and Magnetosphere
NSF9805550$202,3271998–2002PIRePORTER
CAREER: A Simulation Study of Reconnection Layers in the Magnetotail
NSF9507993$209,4831995–2001PIRePORTER

Frequent collaborators

Liang Qiao · Fudan University4 papers (2018–2023)Yi Yang · Fudan University4 papers (2018–2023)Chengpin Shen · Shanghai Medical College of Fudan University3 papers (2020–2023)Fan Yang · Ministry of Education of the People's Republic of China2 papers (2023–2023)Jinzhi Zhao · Fudan University2 papers (2023–2023)Ziyu Fang · Wenzhou Medical University2 papers (2023–2023)Vijini Mallawaarachchi · Australian National University2 papers (2023–2023)Mikhail Kolmogorov · National Institutes of Health2 papers (2016–2019)Pavel A. Pevzner · San Diego Supercomputer Center2 papers (2016–2019)Jianxujie Zheng · Fudan University2 papers (2023–2023)Shaoning Yu · Ningbo University2 papers (2023–2023)Jeffrey Yuan · Harvard University2 papers (2016–2019)Li Wang · Tongji University1 papers (2023–2023)Li Li · Central South University1 papers (2018–2018)Xiaohui Liu · Fudan University1 papers (2020–2020)Bing Wang · Guangzhou University of Chinese Medicine1 papers (2023–2023)Dandan Li · Obstetrics and Gynecology Hospital of Fudan University1 papers (2023–2023)Yongqing Li · BGI Group (China)1 papers (2018–2018)Bin Zhao · Fudan University1 papers (2018–2018)Guanghua Fu · University of Michigan–Ann Arbor1 papers (2018–2018)