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Ryne C. Ramaker

University of Alabama at Birmingham · US
🔎 Find collaborators in Pulmonary and Respiratory Medicine · Molecular Biology →
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Area of research
Pulmonary and Respiratory Medicine · Molecular Biology
Research interest
Research focused on Cancer research and Pancreatic cancer, with related work in CRISPR, Anterior cingulate cortex, Enhancer. Notable publications include 'Post-mortem molecular profiling of three psychiatric disorders', 'Occupancy maps of 208 chromatin-associated proteins in one human cell type', and 'RNA sequencing of pancreatic adenocarcinoma tumors yields novel expression patterns associated with long‐term survival and reveals a role for ANGPTL4'.
h-index
citations
1,053
works
17
NIH funding
primary concept
email

Recent publications

Blood-based tumor mutational burden impacts clinical outcomes of immune checkpoint inhibitor treated breast and prostate cancers
Communications Medicine 2024cited by 9position: middledoi
Long-read genome sequencing for the molecular diagnosis of neurodevelopmental disorders
Human Genetics and Genomics Advances 2021cited by 56position: middledoi
Pooled CRISPR screening in pancreatic cancer cells implicates co-repressor complexes as a cause of multiple drug resistance via regulation of epithelial-to-mesenchymal transition
BMC Cancer 2021cited by 37position: firstdoi
Occupancy maps of 208 chromatin-associated proteins in one human cell type
Nature 2020cited by 171position: middledoi
CRISPR/Cas9-targeted removal of unwanted sequences from small-RNA sequencing libraries
Nucleic Acids Research 2019cited by 39position: middledoi
Population‐Specific Patterns of Epigenetic Defects in the B Cell Lineage in Patients With Systemic Lupus Erythematosus
Arthritis & Rheumatology 2019cited by 35position: middledoi
De novo mutations in the GTP/GDP-binding region of RALA, a RAS-like small GTPase, cause intellectual disability and developmental delay
PLoS Genetics 2018cited by 34position: middledoi
Discovery and Validation of Circulating Biomarkers of Colorectal Adenoma by High-Depth Small RNA Sequencing
Clinical Cancer Research 2018cited by 28position: middledoi
Post-mortem molecular profiling of three psychiatric disorders
Genome Medicine 2017cited by 212position: firstdoi
RNA sequencing-based cell proliferation analysis across 19 cancers identifies a subset of proliferation-informative cancers with a common survival signature
Oncotarget 2017cited by 44position: firstdoi
aRNApipe: a balanced, efficient and distributed pipeline for processing RNA-seq data in high-performance computing environments
Bioinformatics 2017cited by 28position: middledoi
RNA sequencing of pancreatic adenocarcinoma tumors yields novel expression patterns associated with long‐term survival and reveals a role for<i>ANGPTL4</i>
Molecular Oncology 2016cited by 137position: middledoi
Genomic regulation of invasion by STAT3 in triple negative breast cancer
Oncotarget 2016cited by 83position: middledoi
Distinct gene regulatory programs define the inhibitory effects of liver X receptors and PPARG on cancer cell proliferation
Genome Medicine 2016cited by 46position: middledoi
Differential stress induced c-Fos expression and identification of region-specific miRNA-mRNA networks in the dorsal raphe and amygdala of high-responder/low-responder rats
Behavioural Brain Research 2016cited by 39position: middledoi
Identification and function of enhancers in the human genome
Human Molecular Genetics 2016cited by 33position: middledoi
Kinase Gene Expression Profiling of Metastatic Clear Cell Renal Cell Carcinoma Tissue Identifies Potential New Therapeutic Targets
PLoS ONE 2016cited by 22position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

R Myers · Flatiron Health (United States)11 papers (2016–2021) · 9 papers (2016–2021)Andrew A. Hardigan · University of Alabama at Birmingham7 papers (2017–2021)Brittany N. Lasseigne · University of Alabama at Birmingham5 papers (2016–2017)Brian S. Roberts · University of Alabama in Huntsville5 papers (2016–2019)Jason Gertz · University of Utah4 papers (2016–2017)Daniel Savic · St. Jude Children's Research Hospital3 papers (2016–2020) · 3 papers (2016–2021)Angela Jones · Vanderbilt University3 papers (2016–2019)Katherine C. Sexton · University of Alabama at Birmingham2 papers (2016–2016) · 2 papers (2016–2017)Candice J. Coppola · HudsonAlpha Institute for Biotechnology2 papers (2016–2020) · 2 papers (2018–2019)Robert P. Kimberly · University of Alabama at Birmingham2 papers (2018–2019)Donald J. Buchsbaum · University of Alabama at Birmingham2 papers (2016–2016)Gregory M. Cooper · University of Alabama at Birmingham2 papers (2018–2021) · 2 papers (2017–2021) · 2 papers (2016–2020)Eric M. Mendenhall · HudsonAlpha Institute for Biotechnology2 papers (2016–2020)Patsy G. Oliver · University of Alabama at Birmingham2 papers (2016–2016)
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