Area of research
Molecular Biology · Pharmacology
Research interest
Research interests include Metabolomics and Mass Spectrometry Studies, Microbial Natural Products and Biosynthesis, Bioactive Natural Diterpenoids Research, and Advanced Chemical Sensor Technologies.
MSnLib: efficient generation of open multi-stage fragmentation mass spectral libraries
Reproducible mass spectrometry data processing and compound annotation in MZmine 3
Integrative analysis of multimodal mass spectrometry data in MZmine 3
Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics
DeepSAT: Learning Molecular Structures from Nuclear Magnetic Resonance Data
Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity
Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals
Tandem Mass Spectrometry Molecular Networking as a Powerful and Efficient Tool for Drug Metabolism Studies
NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products
Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment
High-confidence structural annotation of metabolites absent from spectral libraries
A community resource for paired genomic and metabolomic data mining
Feature-based molecular networking in the GNPS analysis environment
Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
Mass spectrometry searches using MASST
Database-independent molecular formula annotation using Gibbs sampling through ZODIAC
A Convolutional Neural Network-Based Approach for the Rapid Annotation of Molecularly Diverse Natural Products
Auto-deconvolution and molecular networking of gas chromatography–mass spectrometry data
ReDU: a framework to find and reanalyze public mass spectrometry data
Chemically informed analyses of metabolomics mass spectrometry data with Qemistree
Feature-Based Molecular Networking Analysis of the Metabolites Produced by <i>In Vitro</i> Solid-State Fermentation Reveals Pathways for the Bioconversion of Epigallocatechin Gallate
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
MolNetEnhancer: Enhanced Molecular Networks by Integrating Metabolome Mining and Annotation Tools
Learning representations of microbe–metabolite interactions
MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities
Reproducible Molecular Networking Of Untargeted Mass Spectrometry Data Using GNPS.
Reproducible Molecular Networking Of Untargeted Mass Spectrometry Data Using GNPS.
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science