Area of research
Molecular Biology · Physiology
Research interest
Research interests include Gut microbiota and health, Diet and metabolism studies, Clostridium difficile and Clostridium perfringens research, and Genomics and Phylogenetic Studies.
Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome
Supplementation with a probiotic mixture accelerates gut microbiome maturation and reduces intestinal inflammation in extremely preterm infants
Elucidating the role of the gut microbiota in the physiological effects of dietary fiber
Reporting guidelines for human microbiome research: the STORMS checklist
Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome
SHOGUN: a modular, accurate and scalable framework for microbiome quantification
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea
Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders
Genetic effects on the commensal microbiota in inflammatory bowel disease patients
American Gut: an Open Platform for Citizen Science Microbiome Research
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
US Immigration Westernizes the Human Gut Microbiome
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
Evaluating the Information Content of Shallow Shotgun Metagenomics
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
The gut microbiome of nonhuman primates: Lessons in ecology and evolution
Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity
Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model
SplinectomeR Enables Group Comparisons in Longitudinal Microbiome Studies
Urinary microbiome associated with chronic allograft dysfunction in kidney transplant recipients
Publisher Correction: Enterotypes in the landscape of gut microbial community composition
Enterotypes in the landscape of gut microbial community composition
Functional Genomics of Host–Microbiome Interactions in Humans
A Microbiome Foundation for the Study of Crohn’s Disease
The Treatment-Naive Microbiome in New-Onset Crohn’s Disease
Complex host genetics influence the microbiome in inflammatory bowel disease
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences