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John E. Burke

— · US
Area of research
Molecular Biology · Cell Biology
Research interest
Research interests include PI3K/AKT/mTOR signaling in cancer, Protein Kinase Regulation and GTPase Signaling, Cellular transport and secretion, and Chronic Lymphocytic Leukemia Research.
h-index
54
citations
15,513
works
255
NIH funding
primary concept
Chemistry
email

Recent publications

DET1 dynamics underlie cooperative ubiquitination by CRL4 <sup>DET1-COP1</sup> complexes
Science Advances 2025cited by 4position: middledoi
Targeting Ras-, Rho-, and Rab-family GTPases via a conserved cryptic pocket
Cell 2024cited by 52position: middledoi
Structural insights into perilipin 3 membrane association in response to diacylglycerol accumulation
Nature Communications 2023cited by 51position: middledoi
CERT1 mutations perturb human development by disrupting sphingolipid homeostasis
Journal of Clinical Investigation 2023cited by 42position: middledoi
Accurate prediction of protein structures and interactions using a three-track neural network
Science 2021cited by 5,605position: middledoi
Disease-related mutations in PI3Kγ disrupt regulatory C-terminal dynamics and reveal a path to selective inhibitors
eLife 2021cited by 55position: lastdoi
Crystal structure of an archaeal CorB magnesium transporter
Nature Communications 2021cited by 38position: middledoi
Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments
Nature Methods 2019cited by 756position: middledoi
Characterization of the c10orf76‐PI4KB complex and its necessity for Golgi PI4P levels and enterovirus replication
EMBO Reports 2019cited by 45position: lastdoi
Novel K-Ras G12C Switch-II Covalent Binders Destabilize Ras and Accelerate Nucleotide Exchange
Journal of Chemical Information and Modeling 2018cited by 61position: middledoi
Ras Binder Induces a Modified Switch-II Pocket in GTP and GDP States
Cell chemical biology 2017cited by 116position: middledoi
Deconvolution of Buparlisib’s mechanism of action defines specific PI3K and tubulin inhibitors for therapeutic intervention
Nature Communications 2017cited by 115position: middledoi
Expanding the Scope of Electrophiles Capable of Targeting K-Ras Oncogenes
Biochemistry 2017cited by 94position: middledoi
Diversity-oriented synthesis yields novel multistage antimalarial inhibitors
Nature 2016cited by 264position: middledoi
Design and Structural Characterization of Potent and Selective Inhibitors of Phosphatidylinositol 4 Kinase IIIβ
Journal of Medicinal Chemistry 2016cited by 66position: lastdoi
Using hydrogen deuterium exchange mass spectrometry to engineer optimized constructs for crystallization of protein complexes: Case study of PI4KIIIβ with Rab11
Protein Science 2016cited by 48position: lastdoi

Grants

Collaborative Research: RESEARCH-PGR: Comparative genomics of the capitulum: deciphering the molecular basis of a key floral innovation
NSF2214473$636,4222022–2026PIRePORTER
Evolutionary Genomics of Abiotic Stress Resistance in Wild and Cultivated Sunflowers
NSF1444522$4,172,2902015–2024PIRePORTER
DISSERTATION RESEARCH: Comparative genomic analysis of the Compositae, focusing on Carthamus tinctorius L. (safflower)
NSF1110350$15,0002011–2014PIRePORTER
YIA: Identifying the Targets of Selection During Sunflower Domestication
NSF0653676$590,8872006–2009PIRePORTER
YIA: Identifying the Targets of Selection During Sunflower Domestication
NSF0332411$886,8392003–2006PIRePORTER
Japan JSPS Program: Influence of Thyroid Hormones on the Behavior of Larval Flounder
NSF9121814$37,4921991–1992PIRePORTER
Site-specific Mutagenesis of Sequences Implicated in Auto- catalytic Processing of Intron Within Tetrahymena 26S Ribo- somal RNA Precursor
NSF8502691$90,0001985–1987PIRePORTER
1978 National Needs Postdoctoral Fellowship Program
NSF7815576$14,0251978–1981PIRePORTER

Frequent collaborators

· 7 papers (2016–2024)Kevan M. Shokat · Howard Hughes Medical Institute6 papers (2016–2024)Jacob A. McPhail · University of California, San Francisco3 papers (2016–2019) · 3 papers (2021–2023)Daniel R. Gentile · Howard Hughes Medical Institute2 papers (2017–2018) · 2 papers (2017–2021)Roger Williams · MRC Laboratory of Molecular Biology2 papers (2016–2017) · 2 papers (2021–2023)Florentine U. Rutaganira · Chan Zuckerberg Biohub San Francisco2 papers (2016–2016) · 2 papers (2016–2016)Surita R. Bhatia · University of Massachusetts Amherst1 papers (2023–2023) · 1 papers (2017–2017)Yu Seby Chen · McGill University1 papers (2021–2021)Sophie Krahnke · Leidos (United States)1 papers (2024–2024)Michael V. Airola · Stony Brook University1 papers (2023–2023)Jeffrey S. Glenn · Stanford University1 papers (2016–2016)Braden D. Siempelkamp · University of Saskatchewan1 papers (2017–2017)Lawrence Zhu · Howard Hughes Medical Institute1 papers (2024–2024)Manoj K Rathinaswamy · San Francisco VA Medical Center1 papers (2021–2021) · 1 papers (2023–2023)