Area of research
Molecular Biology · Surgery
Research interest
Research interests include Biology, Genetics, Genome, Computational biology, Population, and Campylobacter jejuni.
Wave succession in the pandemic clone of Vibrio parahaemolyticus driven by gene loss
An ancient ecospecies of Helicobacter pylori
Epistasis, core-genome disharmony, and adaptation in recombining bacteria
Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages
A two-hit epistasis model prevents core genome disharmony in recombining bacteria
Quantifying bacterial evolution in the wild: a birthday problem for <i>Campylobacter</i> lineages
RADpainter and fineRADstructure: Population Inference from RADseq Data
A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk
Rapid evolution of distinct Helicobacter pylori subpopulations in the Americas
MetaPalette: a <i>k</i> -mer Painting Approach for Metagenomic Taxonomic Profiling and Quantification of Novel Strain Variation
Bacterial genomics: Microbial GWAS coming of age
The Kalash Genetic Isolate? The Evidence for Recent Admixture
<tt>RADpainter</tt> and <tt>fineRADstructure</tt> : population inference from RADseq data
Metapalette: A <i>k</i> -Mer Painting Approach for Metagenomic Taxonomic Profiling and Quantification of Novel Strain Variation
MetaPalette: A $k$-mer painting approach for metagenomic taxonomic profiling and quantification of novel strain variation
Rapid evolution of distinct <i>Helicobacter pylori</i> subpopulations in the Americas
Roary: rapid large-scale prokaryote pan genome analysis
The fine-scale genetic structure of the British population
Epidemic Clones, Oceanic Gene Pools, and Eco-LD in the Free Living Marine Pathogen Vibrio parahaemolyticus
The Landscape of Realized Homologous Recombination in Pathogenic Bacteria
Efficient Inference of Recombination Hot Regions in Bacterial Genomes
Epidemic clones, oceanic gene pools and eco-LD in the free living marine pathogen Vibrio parahaemolyticus
Genome-wide association study identifies vitamin B <sub>5</sub> biosynthesis as a host specificity factor in <i>Campylobacter</i>
Recent Acquisition of Helicobacter pylori by Baka Pygmies
Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli
Progressive genome‐wide introgression in agricultural <i>Campylobacter coli</i>