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Kim Lewis

Northeastern University · US
🔎 Find collaborators in Molecular Medicine · Genetics →
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Area of research
Molecular Medicine · Genetics
Research interest
Research interests include Antibiotic Resistance in Bacteria, Bacterial Genetics and Biotechnology, Bacterial biofilms and quorum sensing, and Microbial Natural Products and Biosynthesis.
h-index
77
citations
33,312
works
248
NIH funding
primary concept
Biology
email

Recent publications

Energy expenditure and cellular activity underlie antibiotic tolerance of <i>Pseudomonas aeruginosa</i>.
2026cited by 0position: contributordoi
A deformylase inhibitor expands therapeutic options for Lyme disease
2026cited by 0position: contributordoi
A sulfur-containing nucleoside antibiotic from <i>Photorhabdus</i>.
2025cited by 0position: contributordoi
The dynamic lateral gate of the mitochondrial β-barrel biogenesis machinery is blocked by darobactin A.
2025cited by 0position: contributordoi
Small molecule produced by <i>Photorhabdus</i> interferes with ubiquinone biosynthesis in Gram-negative bacteria.
2024cited by 2position: contributordoi
A Resistance-Evading Antibiotic for Treating Anthrax
2024cited by 1position: contributordoi
An antibiotic from an uncultured bacterium binds to an immutable target
Cell 2023cited by 131position: middledoi
Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A
Nature Communications 2023cited by 37position: middledoi
Teixobactin kills bacteria by a two-pronged attack on the cell envelope
Nature 2022cited by 191position: middledoi
Computational identification of a systemic antibiotic for Gram-negative bacteria
Nature Microbiology 2022cited by 135position: lastdoi
Computational identification of a systemic antibiotic for gram-negative bacteria.
2022cited by 109position: contributordoi
A lipoglycopeptide antibiotic for Gram-positive biofilm-related infections
Science Translational Medicine 2022cited by 32position: middledoi
The Role of Integration Host Factor in Escherichia coli Persister Formation.
2022cited by 20position: contributordoi
A lipoglycopeptide antibiotic for Gram-positive biofilm-related infections.
2022cited by 13position: contributordoi
Recent Progress in Lyme Disease and Remaining Challenges
Frontiers in Medicine 2021cited by 150position: middledoi
Bacterial persisters are a stochastically formed subpopulation of low-energy cells.
2021cited by 121position: contributordoi
A selective antibiotic for Lyme disease
Cell 2021cited by 61position: lastdoi
Predicting antimicrobial mechanism-of-action from transcriptomes: A generalizable explainable artificial intelligence approach.
2021cited by 24position: contributordoi
Novel Antimicrobials from Uncultured Bacteria Acting against Mycobacterium tuberculosis.
2020cited by 33position: contributordoi
A Distinct Microbiome Signature in Posttreatment Lyme Disease Patients.
2020cited by 24position: contributordoi
Definitions and guidelines for research on antibiotic persistence
Nature Reviews Microbiology 2019cited by 1,238position: middledoi
A new antibiotic selectively kills Gram-negative pathogens
Nature 2019cited by 735position: lastdoi
Stochastic Variation in Expression of the Tricarboxylic Acid Cycle Produces Persister Cells.
2019cited by 99position: contributordoi
Genetic Basis of Persister Tolerance to Aminoglycosides in Escherichia coli
mBio 2015cited by 158position: lastdoi
Lassomycin, a Ribosomally Synthesized Cyclic Peptide, Kills Mycobacterium tuberculosis by Targeting the ATP-Dependent Protease ClpC1P1P2
Chemistry & Biology 2014cited by 428position: lastdoi
On the Mechanism of Berberine–INF55 (5-Nitro-2-phenylindole) Hybrid Antibacterials*
Australian Journal of Chemistry 2014cited by 17position: middledoi
A problem of persistence: still more questions than answers?
Nature Reviews Microbiology 2013cited by 274position: middledoi

Grants

Collaborative Research: D3SC: CDS&E: Predictive Discovery of Porphyrin Molecules and their Response Properties using Smart Objects-Enabled Machine Learning
NSF2055669$197,0682021–2026PIRePORTER
CAREER: From Self-Assembled Monolayers to Molecular Multilayers: The Electronic Properties of Molecular Junctions
NSF1150866$575,0002012–2020PIRePORTER
BRIGE: The Design and Characterization of a Multifunctional Chemiresistor Sensor Array
NSF0927057$175,0002009–2012PIRePORTER
SGER: Apoptosis in Bacteria
NSF0132889$50,0002001–2003PIRePORTER
Low Energy Shock in E. coli
NSF9796157$10,0921997–1998PIRePORTER
Low Energy Shock in E. coli
NSF9496291$208,2501994–1997PIRePORTER
"Low Energy Shock in E. coli"
NSF9317013$93,0001994–1995PIRePORTER
The Mechanism of Energy Level Sensing in Escherichia coli
NSF8905286$223,5001989–1993PIRePORTER

Frequent collaborators

· 13 papers (2019–2026)Andrew Camilli · Tufts University2 papers (2015–2019)Nathalie Q. Balaban · Tsinghua University2 papers (2013–2019)Frederick M. Ausubel · Harvard University1 papers (2014–2014)Clémence F. Dunand · University of Illinois Chicago1 papers (2023–2023)Chao Chen · Guiyang Medical University1 papers (2014–2014)Chih‐Wei Chen · University of Illinois Chicago1 papers (2023–2023)Rajmohan Rajamuthiah · Brown University1 papers (2014–2014)Yue Shan · University of North Carolina at Chapel Hill1 papers (2015–2015)Slava S. Epstein · Ningbo University1 papers (2014–2014) · 1 papers (2014–2014) · 1 papers (2019–2019)Gvantsa Gutishvili · Georgia Institute of Technology1 papers (2025–2025)Silvia J. Canas-Duarte · Harvard University1 papers (2021–2021)Thomas C. Marlovits · SpringerNature1 papers (2025–2025)Kathryn A. Diederichs · Gustavus Adolphus College1 papers (2025–2025)Kirsten J. Meyer · University of Toronto1 papers (2021–2021)Susan K. Buchanan · American Chemical Society1 papers (2025–2025)Seyed Majed Modaresi · Broad Institute1 papers (2022–2022)Bryson Hawkins · Northeastern University1 papers (2024–2024)
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