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Yongchao Liu

Johannes Gutenberg University Mainz · DE
Area of research
Molecular Biology · Artificial Intelligence
Research interest
Research focused on Parallel computing and CUDA, with related work in Sequence (biology), Cancer research, SIMD. Notable publications include 'Musket: a multistage k- mer spectrum-based error corrector for Illumina sequence data', 'Long non-coding RNA Linc00152 is involved in cell cycle arrest, apoptosis, epithelial to mesenchymal transition, cell migration and invasion in gastric cancer', and 'CUDASW++ 3.0: accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions'.
h-index
citations
2,938
works
49
NIH funding
primary concept
email

Recent publications

Assessing compound exposure of vulnerable populations under dual inequality of urban heatwaves and green space
Sustainable Cities and Society 2025cited by 4position: middledoi
Short Chain Fatty Acids: Essential Weapons of Traditional Medicine in Treating Inflammatory Bowel Disease
Molecules 2024cited by 34position: middledoi
Tracking annual changes of coastal aquaculture ponds in China during 1986–2021
Aquaculture 2024cited by 16position: middledoi
Land Use Dynamics and Ecosystem Service Value Changes in the Yangtze River Delta Urban Agglomeration Under Different Scenarios
Chinese Geographical Science 2024cited by 7position: middledoi
Spatiotemporal patterns of urban expansion and trade-offs and synergies among ecosystem services in urban agglomerations of China
Ecological Indicators 2023cited by 54position: middledoi
Surface water changes in China's Yangtze River Delta over the past forty years
Sustainable Cities and Society 2023cited by 37position: middledoi
Evaluation and analysis of coastal complex ecological resilience based on multidimensional data: A case study of East China Sea
Ecological Indicators 2023cited by 27position: middledoi
Assessing the cold island effect of urban parks in metropolitan cores: a case study of Hangzhou, China
Environmental Science and Pollution Research 2023cited by 22position: middledoi
Mapping Photovoltaic Panels in Coastal China Using Sentinel-1 and Sentinel-2 Images and Google Earth Engine
Remote Sensing 2023cited by 22position: middledoi
Ecological quality assessment and monitoring using a time-series remote sensing-based ecological index (ts-RSEI)
GIScience & Remote Sensing 2022cited by 83position: middledoi
Tracking annual changes in the distribution and composition of saltmarsh vegetation on the Jiangsu coast of China using Landsat time series–based phenological parameters
Remote Sensing of Environment 2022cited by 64position: middledoi
Thirty-year changes of the coastlines, wetlands, and ecosystem services in the Asia major deltas
Journal of Environmental Management 2022cited by 45position: firstdoi
Mapping Coastal Aquaculture Ponds of China Using Sentinel SAR Images in 2020 and Google Earth Engine
Remote Sensing 2022cited by 37position: middledoi
Ecosystem Stability Assessment of Yancheng Coastal Wetlands, a World Natural Heritage Site
Land 2022cited by 19position: middledoi
Impacts of reclamation derived land use changes on ecosystem services in a typical gulf of eastern China: A case study of Hangzhou bay
Ecological Indicators 2021cited by 48position: middledoi
hnRNP A1 Regulates Alternative Splicing of Tau Exon 10 by Targeting 3′ Splice Sites
Cells 2020cited by 20position: firstdoi
Study on the metabolism toxicity, susceptibility and mechanism of di-(2-ethylhexyl) phthalate on rat liver BRL cells with insulin resistance in vitro
Toxicology 2019cited by 32position: middledoi
Changes of Ecosystem Service Value in a Coastal Zone of Zhejiang Province, China, during Rapid Urbanization
International Journal of Environmental Research and Public Health 2018cited by 47position: middledoi
Spatiotemporal Change Patterns of Coastlines in Zhejiang Province, China, Over the Last Twenty-Five Years
Sustainability 2018cited by 34position: middledoi
Coastline and landscape changes in bay areas caused by human activities: A comparative analysis of Xiangshan Bay, China and Tampa Bay, USA
Journal of Geographical Sciences 2018cited by 26position: middledoi
Improvement of high-glucose and insulin resistance of chromium malate in 3T3-L1 adipocytes by glucose uptake and insulin sensitivity signaling pathways and its mechanism
RSC Advances 2018cited by 12position: middledoi
In Situ Localization of Enzyme Activity in Live Cells by a Molecular Probe Releasing a Precipitating Fluorochrome
Angewandte Chemie International Edition 2017cited by 205position: middledoi
In Situ Localization of Enzyme Activity in Live Cells by a Molecular Probe Releasing a Precipitating Fluorochrome
Angewandte Chemie 2017cited by 50position: middledoi
SRSF2 directly inhibits intron splicing to suppresses cassette exon inclusion
BMB Reports 2017cited by 21position: middledoi
SWhybrid: A Hybrid-Parallel Framework for Large-Scale Protein Sequence Database Search
2017cited by 18position: middledoi
AFS: identification and quantification of species composition by metagenomic sequencing
Bioinformatics 2017cited by 11position: firstdoi
Suppression of 5′ splice-sites through multiple exonic motifs by hnRNP L
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 2017cited by 8position: middledoi
A review on anthropogenic geomorphology
Journal of Geographical Sciences 2016cited by 73position: lastdoi
SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutations
BMC Systems Biology 2016cited by 29position: firstdoi
MSAProbs-MPI: parallel multiple sequence aligner for distributed-memory systems
Bioinformatics 2016cited by 28position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Bertil Schmidt · Johannes Gutenberg University Mainz19 papers (2012–2017)Peng Tian · Ningbo University11 papers (2021–2024)Jialin Li · Shandong University9 papers (2016–2023)Ruiliang Pu · University of South Florida9 papers (2016–2023)Haitao Zhang · Nanchang University8 papers (2022–2024)Luodan Cao · Nanjing Agricultural University7 papers (2018–2023)Jialin Li · Ningbo University4 papers (2018–2025)Guangjian Huang · Fudan University3 papers (2014–2015)Jianhua Zhou · Sun Yat-sen University Cancer Center3 papers (2017–2020)Qiandong Guo · University of South Florida3 papers (2018–2018) · 3 papers (2017–2020)Jialin Li · The First Affiliated Hospital, Sun Yat-sen University3 papers (2018–2023)Chao Sun · South China Agricultural University3 papers (2022–2022) · 3 papers (2017–2020)Shunyi Ai · Ningbo University3 papers (2022–2024)Thomas Hankeln · Johannes Gutenberg University Mainz3 papers (2014–2017)Cheng En Hu · Fudan University3 papers (2014–2015) · 3 papers (2017–2020)Hongbo Gong · Xiamen University3 papers (2021–2024)Fei Fan · Jiangsu University2 papers (2018–2019)