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Rui Zhang

BGI Research · CN
Area of research
Molecular Biology · Cancer Research
Research interest
Research interests include Genomics and Phylogenetic Studies, RNA regulation and disease, MicroRNA in disease regulation, and RNA Research and Splicing.
h-index
48
citations
12,302
works
375
NIH funding
primary concept
email

Recent publications

Improved RNA base editing with guide RNAs mimicking highly edited endogenous ADAR substrates.
2026cited by 6position: contributordoi
EVmiRED: a curated database of miRNA editing landscape in extracellular vesicles.
2026cited by 0position: contributordoi
Aliphatic components formed closed pores of coal-derived hard carbon for Na-ion storage
Journal of Energy Storage 2025cited by 4position: firstdoi
RETRACTED: In Situ Growth of Highly Dispersed TiO<sub>2</sub> in Covalent Organic Frameworks for Photocatalytic H<sub>2</sub> Evolution
Inorganic Chemistry 2025cited by 4position: middledoi
Type III CRISPR-mediated flexible RNA excision with engineered guide RNAs.
2025cited by 2position: contributordoi
Harnessing RNA base editing for diverse applications in RNA biology and RNA therapeutics.
2025cited by 0position: contributordoi
Inhibition of PCSK9 prevents and alleviates cholesterol gallstones through PPARα-mediated CYP7A1 activation
Metabolism 2024cited by 30position: middledoi
Uncovering the Salt‐Controlled Porosity Regulation in Coal‐Derived Hard Carbons for Sodium Energy Storage
Small 2024cited by 26position: middledoi
Associations of the EAT-Lancet reference diet with metabolic dysfunction–associated steatotic liver disease and its severity: A multicohort study
Hepatology 2024cited by 22position: middledoi
Transmission of fluoroquinolones resistance among multidrug-resistant tuberculosis in Shanghai, China: a retrospective population-based genomic epidemiology study
Emerging Microbes & Infections 2024cited by 20position: middledoi
Deep learning model based on contrast-enhanced ultrasound for predicting vessels encapsulating tumor clusters in hepatocellular carcinoma
European Radiology 2024cited by 15position: middledoi
Spatial regulation of NMN supplementation on brain lipid metabolism upon subacute and sub-chronic PM exposure in C57BL/6 mice
Particle and Fibre Toxicology 2024cited by 5position: middledoi
Patients with Asian-type DEL can safely be transfused using RhD-positive blood
Blood 2023cited by 26position: middledoi
Patients with Asian-type DEL can safely be transfused with RhD-positive blood.
2023cited by 24position: contributordoi
An integrative analysis of lipidomics and transcriptomics in various mouse brain regions in response to real-ambient PM2.5 exposure
The Science of The Total Environment 2023cited by 15position: middledoi
Epitranscriptomic subtyping, visualization, and denoising by global motif visualization.
2023cited by 14position: contributordoi
Temporal landscape and translational regulation of A-to-I editing in mouse retina development
2023cited by 0position: contributordoi
Developmental mRNA m5C landscape and regulatory innovations of massive m5C modification of maternal mRNAs in animals
Nature Communications 2022cited by 106position: lastdoi
Developmental mRNA m<sup>5</sup>C landscape and regulatory innovations of massive m<sup>5</sup>C modification of maternal mRNAs in animals.
2022cited by 89position: contributordoi
Virus-specific editing identification approach reveals the landscape of A-to-I editing and its impacts on SARS-CoV-2 characteristics and evolution.
2022cited by 37position: contributordoi
Sequence- and structure-selective mRNA m<sup>5</sup>C methylation by NSUN6 in animals.
2021cited by 79position: contributordoi
Identification of NUTF2 as a Candidate Diagnostic and Prognostic Biomarker Associated with Immune Infiltration in Head and Neck Squamous Cell Carcinoma
OncoTargets and Therapy 2021cited by 8position: firstdoi
Molecular characterization of the nitric oxide synthase gene and its immunomodulation of nitric oxide production in the triangle shell mussel (Hyriopsis cumingii)
Developmental & Comparative Immunology 2021cited by 7position: lastdoi
ADAR mediated A-to-I RNA editing affects SARS-CoV-2 characteristics and fuels its evolution
2021cited by 3position: contributordoi
Dynamic landscape and evolution of m6A methylation in human
Nucleic Acids Research 2020cited by 363position: lastdoi
Dynamic landscape and evolution of m6A methylation in human.
2020cited by 279position: contributordoi
Sequence- and structure-selective mRNA m5C methylation by NSUN6 in animals
National Science Review 2020cited by 138position: lastdoi
irCLASH reveals RNA substrates recognized by human ADARs
Nature Structural & Molecular Biology 2020cited by 59position: lastdoi
irCLASH reveals RNA substrates recognized by human ADARs.
2020cited by 46position: contributordoi
Sense-antisense miRNA pairs constitute an elaborate reciprocal regulatory circuit.
2020cited by 9position: contributordoi

Grants

CISE-ANR: IIS: Small: Federated Learning for AI-driven Rare Disease Recognition for Ciliopathies
NSF2530226$600,0002026–2029PIRePORTER
CAREER: Trustworthy Human-Centered Summarization
NSF2338418$546,0002024–2029PIRePORTER
Travel: NSF Student Travel Grant for 2024 ACM International Conference on Mobile Computing and Networking (ACM MobiCom)
NSF2438050$20,0002024–2026PIRePORTER
Collaborative Research: SaTC: CORE: Small: Secure and Privacy-Preserving Dynamic Spectrum Access
NSF2325564$200,0002023–2026PIRePORTER
RUI: CAS: Production of Highly Reactive Metal-Oxo Species with Molecular Oxygen and Visible Light for the Selective Oxidative Catalysis
NSF2154579$225,5602022–2026PIRePORTER
NSF Student Travel Grant for 2020 IEEE Conference on Communications and Network Security (CNS)
NSF2011840$18,0002020–2023PIRePORTER
NSF Student Travel Grant for 2020 ACM SIGCOMM Symposium on Software Defined Networking (SDN) Research (SOSR)
NSF2011914$15,0002020–2023PIRePORTER
SaTC: CORE: Small: Collaborative: Trustworthy Hierarchical Edge Computing
NSF1933047$250,0002019–2023PIRePORTER
Student Travel Grant for the Seventh IEEE International Conference on Healthcare Informatics (ICHI 2019)
NSF1931603$16,0002019–2020PIRePORTER
RUI: Production of Highly Reactive Metal-Oxo Species with Molecular Oxygen and Visible Light for the Selective Oxidative Catalysis
NSF1764315$250,1252018–2022PIRePORTER
SaTC: CORE: Small: Secure Mobile Cloud Sensing
NSF1718078$500,0002017–2021PIRePORTER
CAREER: Secure Database-Driven Dynamic Spectrum Sharing
NSF1651954$500,0002017–2023PIRePORTER
NeTS: Medium: Collaborative Research: Secure and Usable Indoor Navigation for Individuals with Visual Impairment
NSF1700039$233,6902016–2020PIRePORTER
SBIR Phase I: Software Analysis Tools for Field Specialization of Database Management Systems
NSF1548136$174,9552016–2016PIRePORTER
TWC: Small: Collaborative: Secure and Usable Mobile Authentication for People with Visual Impairment
NSF1700032$58,8882016–2018PIRePORTER
RUI: Production of Highly Reactive Metal-Oxo Species with Molecular Oxygen and Visible Light for the Selective Oxidative Catalysis
NSF1464886$300,4682015–2019PIRePORTER
NeTS: Medium: Collaborative Research: Secure and Usable Indoor Navigation for Individuals with Visual Impairment
NSF1514014$124,9222015–2016PIRePORTER
TWC: Small: Collaborative: Secure and Usable Mobile Authentication for People with Visual Impairment
NSF1422301$149,9992014–2016PIRePORTER
RUI: Production of Highly Reactive Metal-Oxo Species with Molecular Oxygen and Visible Light for the Selective Oxidative Catalysis
NSF1213971$266,9992012–2016PIRePORTER

Frequent collaborators

· 17 papers (2019–2026)Shunjiang Xu · First Affiliated Hospital of Hebei Medical University6 papers (2015–2019)Dongsheng Cui · Handan College6 papers (2015–2019)Qingfu Zhang · Tianjin University of Science and Technology5 papers (2015–2017)Lei Jiang · Yuhuangding Hospital5 papers (2016–2019)Zanchao Liu · Hebei Medical University5 papers (2015–2019)Tao Huang · Huazhong University of Science and Technology4 papers (2019–2022)Xueni Zhao · Chengdu University of Traditional Chinese Medicine4 papers (2020–2022)Wanying Chen · University of Science and Technology of China4 papers (2019–2022)Jianheng Liu · Cornell University3 papers (2019–2022)Wenxuan Liu · South China Normal University3 papers (2016–2019)Yusen Zhang · Pennsylvania State University3 papers (2020–2022)Jin Billy Li · Palo Alto University3 papers (2015–2017)Huimin Zhou · Jiangsu University2 papers (2015–2016)Tianxuan Zhao · Sun Yat-sen University2 papers (2020–2022)Yue Jiang · Sun Yat-sen University2 papers (2023–2024) · 2 papers (2022–2023)Hu Zhang · Fujian Normal University2 papers (2024–2025)Xiao‐Wen Zeng · Ministry of the Environment2 papers (2023–2024)Guang‐Hui Dong · Guangzhou Automobile Group (China)2 papers (2023–2024)