Area of research
Molecular Biology · Genetics
Research interest
Research focused on Resource (disambiguation) and Computational biology, with related work in Annotation, Genome, Server. Notable publications include 'RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes', 'Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center', and 'KBase: The United States Department of Energy Systems Biology Knowledgebase'.
BV-BRC: a unified bacterial and viral bioinformatics resource with expanded functionality and AI integration
Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
KBase: The United States Department of Energy Systems Biology Knowledgebase
PATRIC as a unique resource for studying antimicrobial resistance
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center
PATtyFams: Protein Families for the Microbial Genomes in the PATRIC Database
RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes
Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum
SEED Servers: High-Performance Access to the SEED Genomes, Annotations, and Metabolic Models