← back to search

Andrés Cubillos-Ruiz

Massachusetts Institute of Technology · US
Area of research
Molecular Biology · Ecology
Research interest
Research interests include Microbial Community Ecology and Physiology, Protist diversity and phylogeny, Genomics and Phylogenetic Studies, and Microbial Natural Products and Biosynthesis.
h-index
14
citations
3,891
works
30
NIH funding
primary concept
Biology
email

Recent publications

Discovery of a structural class of antibiotics with explainable deep learning
Nature 2023cited by 393position: middledoi
An engineered live biotherapeutic for the prevention of antibiotic-induced dysbiosis
Nature Biomedical Engineering 2022cited by 92position: firstdoi
Engineering living therapeutics with synthetic biology
Nature Reviews Drug Discovery 2021cited by 315position: firstdoi
A Deep Learning Approach to Antibiotic Discovery
Cell 2020cited by 2,144position: middledoi
Probiotic strains detect and suppress cholera in mice
Science Translational Medicine 2018cited by 261position: middledoi
Evolutionary radiation of lanthipeptides in marine cyanobacteria
Proceedings of the National Academy of Sciences 2017cited by 89position: firstdoi
Imaging secondary metabolism of Streptomyces sp. Mg1 during cellular lysis and colony degradation of competing Bacillus subtilis
Antonie van Leeuwenhoek 2012cited by 63position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

James J. Collins · Broad Institute of MIT and Harvard5 papers (2018–2023)Nina M. Donghia · Harvard University3 papers (2020–2023)Wengong Jin · Broad Institute of MIT and Harvard2 papers (2020–2023)Jonathan Stokes · McMaster University2 papers (2020–2023)Victoria M. Tran · University of San Francisco1 papers (2020–2020)Tingxi Guo · Massachusetts Institute of Technology1 papers (2021–2021)Aarti Krishnan · Massachusetts Institute of Technology1 papers (2023–2023)Kyle Swanson · Stanford University1 papers (2020–2020)Melis N. Anahtar · Massachusetts Institute of Technology1 papers (2023–2023)Regina Barzilay · IIT@MIT1 papers (2020–2020)William K. Russell · Tulane University1 papers (2012–2012) · 1 papers (2023–2023)Paul D. Straight · University of Colorado Boulder1 papers (2012–2012)Jessie W Berta-Thompson · Massachusetts Institute of Technology1 papers (2017–2017) · 1 papers (2023–2023)Lindsey A. Carfrae · Saint Michael's College1 papers (2020–2020)Timothy K. Lu · Massachusetts Institute of Technology1 papers (2021–2021)Julián Ávila-Pacheco · Broad Institute1 papers (2022–2022)Ning Mao · North China University of Science and Technology1 papers (2018–2018) · 1 papers (2023–2023)