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Ruben Dries

Boston Medical Center · US
Area of research
Molecular Biology · Oncology
Research interest
Research interests include Single-cell and spatial transcriptomics, Histone Deacetylase Inhibitors Research, Lung Cancer Research Studies, and Immune cells in cancer.
h-index
23
citations
6,931
works
123
NIH funding
primary concept
email

Recent publications

Giotto Suite: a multiscale and technology-agnostic spatial multiomics analysis ecosystem
Nature Methods 2025cited by 17position: lastdoi
Activation and targetability of TYMP–IL-6–TF signaling in the skin microenvironment in uremic calciphylaxis
Science Translational Medicine 2025cited by 8position: middledoi
Aberrant Activation of Wound-Healing Programs within the Metastatic Niche Facilitates Lung Colonization by Osteosarcoma Cells
Clinical Cancer Research 2024cited by 11position: middledoi
Mesenchymal and adrenergic cell lineage states in neuroblastoma possess distinct immunogenic phenotypes
Nature Cancer 2022cited by 83position: middledoi
Multi-modal profiling of human fetal liver hematopoietic stem cells reveals the molecular signature of engraftment
Nature Communications 2022cited by 46position: middledoi
Analyzing Spatial Transcriptomics Data Using Giotto
Current Protocols 2022cited by 22position: lastdoi
The crosstalk within the breast tumor microenvironment in type II diabetes: Implications for cancer disparities
Frontiers in Endocrinology 2022cited by 14position: middledoi
Giotto: a toolbox for integrative analysis and visualization of spatial expression data
Genome biology 2021cited by 930position: firstdoi
Discovery and resistance mechanism of a selective CDK12 degrader
Nature Chemical Biology 2021cited by 134position: middledoi
Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+
Nature 2019cited by 1,786position: middledoi
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program
Nature 2019cited by 662position: middledoi
CDK12 loss in cancer cells affects DNA damage response genes through premature cleavage and polyadenylation
Nature Communications 2019cited by 266position: middledoi
CDK7 Inhibition Potentiates Genome Instability Triggering Anti-tumor Immunity in Small Cell Lung Cancer
Cancer Cell 2019cited by 222position: middledoi
BORIS promotes chromatin regulatory interactions in treatment-resistant cancer cells
Nature 2019cited by 142position: middledoi
Identification of spatially associated subpopulations by combining scRNAseq and sequential fluorescence in situ hybridization data
Nature Biotechnology 2018cited by 290position: middledoi
Genomic and Functional Fidelity of Small Cell Lung Cancer Patient-Derived Xenografts
Cancer Discovery 2018cited by 215position: middledoi
CDK4/6 Inhibition Augments Antitumor Immunity by Enhancing T-cell Activation
Cancer Discovery 2017cited by 773position: middledoi
Zeb2 Regulates Cell Fate at the Exit from Epiblast State in Mouse Embryonic Stem Cells
Stem Cells 2016cited by 59position: middledoi
Directed Migration of Cortical Interneurons Depends on the Cell-Autonomous Action of Sip1
Neuron 2013cited by 128position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Guo‐Cheng Yuan · Tisch Hospital7 papers (2018–2025)Rani E. George · Dana-Farber/Boston Children's Cancer and Blood Disorders Center3 papers (2019–2021)Yang Gao · Shanxi Medical University3 papers (2019–2021)Nathanael S. Gray · Stanford University3 papers (2019–2021)Long Cai · California Institute of Technology3 papers (2018–2021)Qian Zhu · Qinghai University3 papers (2018–2021)Steven Goossens · Université Claude Bernard Lyon 12 papers (2013–2016)Danny Huylebroeck · KU Leuven2 papers (2013–2016)Andrea Conidi · KU Leuven2 papers (2013–2016) · 2 papers (2013–2016)Jeffrey P. Sheridan · Boston Medical Center2 papers (2024–2025)Frank Grosveld · University of Manitoba2 papers (2013–2016)Chee-Huat Linus Eng · California Institute of Technology2 papers (2019–2021)Annick Francis · KU Leuven2 papers (2013–2016)Matthias Geyer · University Hospital Bonn2 papers (2019–2021)Nicholas Kwiatkowski · Woomera Therapeutics2 papers (2019–2021)Jiaji G. Chen · Boston University2 papers (2022–2025)Wilfred F. J. van IJcken · Rotterdam University of Applied Sciences2 papers (2013–2016)Jody J. Haigh · University of Manitoba2 papers (2013–2016)Tinghu Zhang · Stanford University2 papers (2019–2021)