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Chen-Shan Chin

Next Generation Technology (United States) ·
Area of research
Molecular Biology · Plant Science
Research interest
Research interests include Genomics and Phylogenetic Studies, Chromosomal and Genetic Variations, CRISPR and Genetic Engineering, and RNA and protein synthesis mechanisms.
h-index
54
citations
27,349
works
126
NIH funding
primary concept
Biology
email

Recent publications

Complex genetic variation in nearly complete human genomes
Nature 2025cited by 66position: middledoi
Author Correction: Complex genetic variation in nearly complete human genomes
Nature 2025cited by 2position: middledoi
The complete sequence and comparative analysis of ape sex chromosomes
Nature 2024cited by 122position: middledoi
Complex genetic variation in nearly complete human genomes
bioRxiv (Cold Spring Harbor Laboratory) 2024cited by 27position: middledoi
The complete sequence of a human Y chromosome
Nature 2023cited by 445position: middledoi
Long-read whole-genome analysis of human single cells
Nature Communications 2023cited by 46position: middledoi
The complete sequence of a human genome
Science 2022cited by 3,266position: middledoi
A complete reference genome improves analysis of human genetic variation
Science 2022cited by 425position: middledoi
Curated variation benchmarks for challenging medically relevant autosomal genes
Nature Biotechnology 2022cited by 250position: middledoi
Semi-automated assembly of high-quality diploid human reference genomes
Nature 2022cited by 223position: middledoi
Benchmarking challenging small variants with linked and long reads
Cell Genomics 2022cited by 204position: middledoi
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions
Nature Communications 2021cited by 189position: middledoi
Dynamic prediction of renal survival among deeply phenotyped kidney transplant recipients using artificial intelligence: an observational, international, multicohort study
The Lancet Digital Health 2021cited by 63position: middledoi
Chromosome-scale, haplotype-resolved assembly of human genomes
Nature Biotechnology 2020cited by 204position: middledoi
A diploid assembly-based benchmark for variants in the major histocompatibility complex
Nature Communications 2020cited by 101position: firstdoi
Amplification-free long-read sequencing reveals unforeseen CRISPR-Cas9 off-target activity
Genome biology 2020cited by 68position: middledoi
Trajectories of glomerular filtration rate and progression to end stage kidney disease after kidney transplantation
Kidney International 2020cited by 63position: middledoi
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
Nature Biotechnology 2019cited by 1,919position: middledoi
Multi-platform discovery of haplotype-resolved structural variation in human genomes
Nature Communications 2019cited by 1,035position: middledoi
Human-specific tandem repeat expansion and differential gene expression during primate evolution
Proceedings of the National Academy of Sciences 2019cited by 158position: middledoi
Comprehensive analysis of single molecule sequencing-derived complete genome and whole transcriptome of Hyposidra talaca nuclear polyhedrosis virus
Scientific Reports 2018cited by 12position: middledoi
Author Correction: Comprehensive analysis of single molecule sequencing-derived complete genome and whole transcriptome of Hyposidra talaca nuclear polyhedrosis virus
Scientific Reports 2018cited by 0position: middledoi
Improved maize reference genome with single-molecule technologies
Nature 2017cited by 1,346position: middledoi
<i>De novo</i> PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads
GigaScience 2017cited by 265position: middledoi
Heterogeneous resistance to quizartinib in acute myeloid leukemia revealed by single-cell analysis
Blood 2017cited by 203position: middledoi
Phased diploid genome assembly with single-molecule real-time sequencing
Nature Methods 2016cited by 2,204position: firstdoi
Long-read sequence assembly of the gorilla genome
Science 2016cited by 395position: middledoi
Chromosomal-Level Assembly of the Asian Seabass Genome Using Long Sequence Reads and Multi-layered Scaffolding
PLoS Genetics 2016cited by 219position: middledoi
Assembly and diploid architecture of an individual human genome via single-molecule technologies
Nature Methods 2015cited by 562position: middledoi
Extending reference assembly models
Genome Biology 2015cited by 199position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Jonas Korlach · University of Vienna4 papers (2013–2018)Paul Peluso · Pacific Biosciences (United States)3 papers (2014–2020) · 2 papers (2018–2018) · 2 papers (2018–2018)Subhra Chaudhuri · Gilead Sciences (United States)2 papers (2018–2018)Christopher Dunn · American College of Rheumatology2 papers (2016–2016) · 2 papers (2018–2018)George Thomas · Georgetown University2 papers (2018–2018)Evan E. Eichler · Howard Hughes Medical Institute2 papers (2013–2016)Neil P. Shah · University of California, San Francisco2 papers (2012–2017) · 2 papers (2012–2017) · 2 papers (2018–2018)Alicia Clum · Lawrence Berkeley National Laboratory2 papers (2013–2016) · 2 papers (2018–2018)Fritz J. Sedlazeck · Baylor College of Medicine2 papers (2016–2020)Alexander E. Perl · Hospital of the University of Pennsylvania2 papers (2012–2017) · 2 papers (2012–2017)Lars Feuk · Uppsala University2 papers (2020–2023) · 2 papers (2018–2018) · 2 papers (2018–2018)