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Ye Gao

Shanxi Medical University · CN
Area of research
Molecular Biology · Genetics
Research interest
Research interests include Bacterial Genetics and Biotechnology, RNA and protein synthesis mechanisms, Microbial Metabolic Engineering and Bioproduction, and Genomics and Phylogenetic Studies.
h-index
28
citations
2,661
works
128
NIH funding
primary concept
email

Recent publications

Laboratory Evolution Reveals Transcriptional Mechanisms Underlying Thermal Adaptation of <i>Escherichia coli</i>
Genome Biology and Evolution 2025cited by 5position: middledoi
A multi-scale expression and regulation knowledge base for<i>Escherichia coli</i>
Nucleic Acids Research 2023cited by 59position: middledoi
Coordination of CcpA and CodY Regulators in Staphylococcus aureus USA300 Strains
mSystems 2022cited by 27position: middledoi
Unraveling the functions of uncharacterized transcription factors in <i>Escherichia coli</i> using ChIP-exo
Nucleic Acids Research 2021cited by 54position: firstdoi
Identification of a transcription factor, PunR, that regulates the purine and purine nucleoside transporter punC in E. coli
Communications Biology 2021cited by 25position: middledoi
DeepTFactor: A deep learning-based tool for the prediction of transcription factors
Proceedings of the National Academy of Sciences 2020cited by 156position: middledoi
The Escherichia coli transcriptome mostly consists of independently regulated modules
Nature Communications 2019cited by 263position: middledoi
Cellular responses to reactive oxygen species are predicted from molecular mechanisms
Proceedings of the National Academy of Sciences 2019cited by 126position: middledoi
Systematic discovery of uncharacterized transcription factors in <i>Escherichia coli</i> K-12 MG1655
Nucleic Acids Research 2018cited by 116position: firstdoi
Systems assessment of transcriptional regulation on central carbon metabolism by Cra and CRP
Nucleic Acids Research 2018cited by 105position: middledoi
Global transcriptional regulatory network for <i>Escherichia coli</i> robustly connects gene expression to transcription factor activities
Proceedings of the National Academy of Sciences 2017cited by 118position: middledoi
Thermosensitivity of growth is determined by chaperone-mediated proteome reallocation
Proceedings of the National Academy of Sciences 2017cited by 106position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Bernhard Ø. Palsson · Novo Nordisk Foundation12 papers (2017–2025)Anand V. Sastry · University of California San Diego7 papers (2017–2023)Richard Szubin · University of California San Diego5 papers (2019–2025)Ying Hefner · University of California San Diego5 papers (2019–2025)Laurence Yang · Queen's University5 papers (2017–2019)Nathan Mih · University of California San Diego4 papers (2017–2019)James T. Yurkovich · Buck Institute for Research on Aging4 papers (2017–2021)Donghyuk Kim · Korea University4 papers (2017–2019)Byung-kwan Cho · University of California, San Diego3 papers (2018–2021)Sang Woo Seo · Seoul National University3 papers (2018–2019)Ke Chen · University of California San Diego3 papers (2017–2021)Irina A. Rodionova · University of California San Diego2 papers (2021–2021)Justin Tan · Sutter Roseville Medical Center2 papers (2017–2019)Troy E. Sandberg · University of California San Diego2 papers (2019–2025)Adam M. Feist · Novo Nordisk Foundation2 papers (2019–2025)Kevin Rychel · University of California San Diego2 papers (2023–2025)Xin Fang · Bristol-Myers Squibb (Germany)2 papers (2017–2018)Sibei Xu · University of California San Diego2 papers (2019–2025)Colton J. Lloyd · University of California San Diego2 papers (2017–2019)Hyun Gyu Lim · Inha University2 papers (2021–2021)