Area of research
Molecular Biology
Research interest
Research interests include Single-cell and spatial transcriptomics, Genomics and Phylogenetic Studies, RNA Research and Splicing, and RNA and protein synthesis mechanisms.
Detection of viral sequences at single-cell resolution identifies novel viruses associated with host gene expression changes
Long-read sequencing transcriptome quantification with lr-kallisto
The Biodiversity Cell Atlas: mapping the tree of life at cellular resolution
Geospatially informed representation of spatial genomics data with SpatialFeatureExperiment
PSCA-CAR T cell therapy in metastatic castration-resistant prostate cancer: a phase 1 trial
Deciphering the impact of genomic variation on function
kallisto, bustools and kb-python for quantifying bulk, single-cell and single-nucleus RNA-seq
A Python library for probabilistic analysis of single-cell omics data
A multimodal cell census and atlas of the mammalian primary motor cortex
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Whole-animal multiplexed single-cell RNA-seq reveals transcriptional shifts across <i>Clytia</i> medusa cell types
Isoform cell-type specificity in the mouse primary motor cortex
Massively scaled-up testing for SARS-CoV-2 RNA via next-generation sequencing of pooled and barcoded nasal and saliva samples
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
Multimodal Analysis of Cell Types in a Hypothalamic Node Controlling Social Behavior
Association mapping from sequencing reads using k-mers
Gene-level differential analysis at transcript-level resolution
Single-cell analysis at the threshold
Estimating intrinsic and extrinsic noise from single-cell gene expression measurements
Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas
The NIH BD2K center for big data in translational genomics
Human Intestinal Tissue with Adult Stem Cell Properties Derived from Pluripotent Stem Cells
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
Differential analysis of gene regulation at transcript resolution with RNA-seq
SHAPE–Seq: High‐Throughput RNA Structure Analysis