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Michael J. Trnka

University of California, San Francisco · US
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Area of research
Molecular Biology
Research interest
Research interests include Genomics and Chromatin Dynamics, RNA and protein synthesis mechanisms, Epigenetics and DNA Methylation, and Fungal and yeast genetics research.
h-index
25
citations
4,426
works
57
NIH funding
primary concept
email

Recent publications

SARS-CoV-2 nucleocapsid protein forms condensates with viral genomic RNA
PLoS Biology 2021cited by 169position: middledoi
LEM2 phase separation promotes ESCRT-mediated nuclear envelope reformation
Nature 2020cited by 156position: middledoi
An ER translocon for multi-pass membrane protein biogenesis
eLife 2020cited by 145position: middledoi
HP1 reshapes nucleosome core to promote phase separation of heterochromatin
Nature 2019cited by 537position: middledoi
First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study
Analytical Chemistry 2019cited by 153position: middledoi
Histone H3 binding to the PHD1 domain of histone demethylase KDM5A enables active site remodeling
Nature Communications 2019cited by 51position: middledoi
The nucleosomal acidic patch relieves auto-inhibition by the ISWI remodeler SNF2h
eLife 2018cited by 82position: middledoi
Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin
Nature 2017cited by 1,808position: middledoi
Regulation of Rvb1/Rvb2 by a Domain within the INO80 Chromatin Remodeling Complex Implicates the Yeast Rvbs as Protein Assembly Chaperones
Cell Reports 2017cited by 57position: middledoi
Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex
Cell 2016cited by 242position: middledoi
Molecular architecture of the yeast Mediator complex
eLife 2015cited by 155position: middledoi
Improved Peak Detection and Deconvolution of Native Electrospray Mass Spectra from Large Protein Complexes
Journal of the American Society for Mass Spectrometry 2015cited by 58position: middledoi
Matching Cross-linked Peptide Spectra: Only as Good as the Worse Identification
Molecular & Cellular Proteomics 2013cited by 185position: firstdoi
Structure of the Mediator Head module bound to the carboxy-terminal domain of RNA polymerase II
Proceedings of the National Academy of Sciences 2012cited by 121position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Alma L. Burlingame · University of California, San Francisco12 papers (2012–2020)Geeta J. Narlikar · University of California, San Francisco4 papers (2017–2019) · 3 papers (2012–2016) · 3 papers (2012–2016)Philip J. Robinson · University of Glasgow3 papers (2015–2016)Andrej Săli · QB32 papers (2015–2017)Danica Galonić Fujimori · University of California, San Francisco2 papers (2015–2019) · 2 papers (2015–2016)Jonathan B. Johnston · University of California, San Francisco2 papers (2017–2017)Patrick R. Griffin · Scripps Research Institute2 papers (2019–2019)Venkatasubramanian Dharmarajan · Scripps Research Institute2 papers (2019–2019)Dollie LaJoie · University of Utah1 papers (2020–2020)Coral Y. Zhou · University of Kansas1 papers (2017–2017) · 1 papers (2016–2016)James R. Fuller · University of Chicago1 papers (2020–2020) · 1 papers (2021–2021)Katharine S. Ullman · University of Utah1 papers (2020–2020)Alexander von Appen · Center for Systems Biology Dresden1 papers (2020–2020)Robert J. Chalkley · University of California, San Francisco1 papers (2013–2013)Luke S. Ferro · University of California, Berkeley1 papers (2021–2021)
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