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Matthew Berriman

Wellcome Sanger Institute · GB
Area of research
Parasitology · Public Health, Environmental and Occupational Health
Research interest
Research interests include Parasites and Host Interactions, Parasite Biology and Host Interactions, Malaria Research and Control, and Trypanosoma species research and implications.
h-index
113
citations
65,229
works
496
NIH funding
primary concept
email

Recent publications

Genome-wide analysis of Schistosoma mansoni reveals limited population structure and possible praziquantel drug selection pressure within Ugandan hot-spot communities
PLoS neglected tropical diseases 2022cited by 14position: middledoi
Publisher Correction: Genomic reconstruction of the SARS CoV-2 epidemic in England
Nature 2022cited by 0position: middledoi
Genomic reconstruction of the SARS-CoV-2 epidemic in England
Nature 2021cited by 118position: middledoi
Mapping Rora expression in resting and activated CD4+ T cells
PLoS ONE 2021cited by 43position: middledoi
Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm
Communications Biology 2020cited by 166position: middledoi
Global genome diversity of the Leishmania donovani complex
eLife 2020cited by 144position: middledoi
Refining the transcriptome of the human malaria parasite Plasmodium falciparum using amplification-free RNA-seq
BMC Genomics 2020cited by 106position: middledoi
Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni
Nature Communications 2020cited by 96position: lastdoi
Ecological divergence and hybridization of Neotropical <i>Leishmania</i> parasites
Proceedings of the National Academy of Sciences 2020cited by 80position: middledoi
Sex chromosome evolution in parasitic nematodes of humans
Nature Communications 2020cited by 52position: middledoi
Genomic analysis of natural intra-specific hybrids among Ethiopian isolates of Leishmania donovani
PLoS neglected tropical diseases 2020cited by 25position: middledoi
Nearly Complete Genome Sequence of Brugia malayi Strain FR3
Microbiology Resource Announcements 2020cited by 21position: middledoi
Comparative genomics of parasite flatworms
HAL (Le Centre pour la Communication Scientifique Directe) 2020cited by 0position: last
Long read assemblies of geographically dispersed Plasmodium falciparum isolates reveal highly structured subtelomeres
Wellcome Open Research 2018cited by 167position: lastdoi
Biology and genome of a newly discovered sibling species of Caenorhabditis elegans
Nature Communications 2018cited by 164position: middledoi
Flatworm-specific transcriptional regulators promote the specification of tegumental progenitors in Schistosoma mansoni
eLife 2018cited by 93position: middledoi
Genetic Diversity of Cryptosporidium hominis in a Bangladeshi Community as Revealed by Whole-Genome Sequencing
The Journal of Infectious Diseases 2018cited by 65position: middledoi
Modulation of Aneuploidy in <i>Leishmania donovani</i> during Adaptation to Different <i>In Vitro</i> and <i>In Vivo</i> Environments and Its Impact on Gene Expression
mBio 2017cited by 208position: middledoi
<i>pfk13</i> -Independent Treatment Failure in Four Imported Cases of Plasmodium falciparum Malaria Treated with Artemether-Lumefantrine in the United Kingdom
Antimicrobial Agents and Chemotherapy 2017cited by 109position: middledoi
The genomic basis of parasitism in the Strongyloides clade of nematodes
Nature Genetics 2016cited by 278position: lastdoi
Evolutionary genomics of epidemic visceral leishmaniasis in the Indian subcontinent
eLife 2016cited by 188position: middledoi
The genome of Onchocerca volvulus, agent of river blindness
Nature Microbiology 2016cited by 146position: middledoi
Stage-Specific Transcriptome and Proteome Analyses of the Filarial Parasite Onchocerca volvulus and Its <i>Wolbachia</i> Endosymbiont
mBio 2016cited by 70position: middledoi
WormBase 2016: expanding to enable helminth genomic research
Nucleic Acids Research 2015cited by 389position: middledoi
A comprehensive evaluation of rodent malaria parasite genomes and gene expression
BMC Biology 2014cited by 288position: middledoi
Genome Sequence of the Tsetse Fly ( <i>Glossina morsitans</i> ): Vector of African Trypanosomiasis
Science 2014cited by 259position: middledoi
Phosphoinositide Metabolism Links cGMP-Dependent Protein Kinase G to Essential Ca2+ Signals at Key Decision Points in the Life Cycle of Malaria Parasites
PLoS Biology 2014cited by 235position: middledoi
Genome sequencing of chimpanzee malaria parasites reveals possible pathways of adaptation to human hosts
Nature Communications 2014cited by 134position: lastdoi
Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes
Nature Protocols 2014cited by 63position: middledoi
The genome of the sparganosis tapeworm Spirometra erinaceieuropaeiisolated from the biopsy of a migrating brain lesion
Genome biology 2014cited by 59position: lastdoi

Grants

No grants ingested yet.

Frequent collaborators

James A. Cotton · University of Iowa10 papers (2012–2022)Mandy Sanders · University of Iowa10 papers (2012–2020)Nancy Holroyd · Tufts University7 papers (2014–2022)Hayley M. Bennett · University of Georgia5 papers (2014–2020)Thomas D. Otto · University of Glasgow5 papers (2014–2020)Alan Tracey · Wellcome Sanger Institute4 papers (2018–2020) · 3 papers (2017–2020)Isheng Jason Tsai · National Taiwan University3 papers (2014–2018)Bhavana Harsha · European Bioinformatics Institute3 papers (2014–2016)Chris Newbold · Pennsylvania State University3 papers (2014–2018)Effrossyni Gkrania‐Klotsas · London School of Hygiene & Tropical Medicine3 papers (2014–2017)Jean‐Claude Dujardin · University of Antwerp3 papers (2017–2020)Avril Coghlan · Tufts University3 papers (2014–2020)Michael A. Miles · London School of Hygiene & Tropical Medicine3 papers (2020–2020)Julian C. Rayner · University of Alabama at Birmingham3 papers (2014–2020)Alexandra Grote · New York University3 papers (2016–2020)Elodie Ghedin · National Institutes of Health3 papers (2016–2020)Peter L. Chiodini · London School of Hygiene & Tropical Medicine3 papers (2014–2017) · 3 papers (2016–2020)Ulrike Böhme · University of Liverpool3 papers (2014–2018)