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James A. Cotton

University of Iowa · US
Area of research
Parasitology · Public Health, Environmental and Occupational Health
Research interest
Research interests include Biology, Genome, Genetics, Leishmania donovani, Evolutionary biology, and Haemonchus contortus.
h-index
citations
2,932
works
21
NIH funding
primary concept
email

Recent publications

Investigation of parasite genetic variation and systemic immune responses in patients presenting with different clinical presentations of cutaneous leishmaniasis caused by Leishmania aethiopica
Infectious Diseases of Poverty 2024cited by 11position: middledoi
Cutaneous Leishmaniasis in a Newly Established Treatment Centre in the Lay Gayint District, Northwest Ethiopia
Skin Health and Disease 2023cited by 15position: middledoi
Genome-wide analysis of Schistosoma mansoni reveals limited population structure and possible praziquantel drug selection pressure within Ugandan hot-spot communities
PLoS neglected tropical diseases 2022cited by 14position: lastdoi
Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm
Communications Biology 2020cited by 166position: lastdoi
Global genome diversity of the Leishmania donovani complex
eLife 2020cited by 144position: lastdoi
Ecological divergence and hybridization of Neotropical <i>Leishmania</i> parasites
Proceedings of the National Academy of Sciences 2020cited by 80position: middledoi
Sex chromosome evolution in parasitic nematodes of humans
Nature Communications 2020cited by 52position: middledoi
Genomic analysis of natural intra-specific hybrids among Ethiopian isolates of Leishmania donovani
PLoS neglected tropical diseases 2020cited by 25position: firstdoi
Nearly Complete Genome Sequence of Brugia malayi Strain FR3
Microbiology Resource Announcements 2020cited by 21position: middledoi
Novel 2D and 3D Assays to Determine the Activity of Anti-Leishmanial Drugs
Microorganisms 2020cited by 20position: middledoi
Genetic Diversity of Cryptosporidium hominis in a Bangladeshi Community as Revealed by Whole-Genome Sequencing
The Journal of Infectious Diseases 2018cited by 65position: middledoi
Genome wide comparison of Ethiopian Leishmania donovani strains reveals differences potentially related to parasite survival
PLoS Genetics 2018cited by 56position: middledoi
Modulation of Aneuploidy in <i>Leishmania donovani</i> during Adaptation to Different <i>In Vitro</i> and <i>In Vivo</i> Environments and Its Impact on Gene Expression
mBio 2017cited by 208position: middledoi
The genomic basis of parasitism in the Strongyloides clade of nematodes
Nature Genetics 2016cited by 278position: middledoi
Evolutionary genomics of epidemic visceral leishmaniasis in the Indian subcontinent
eLife 2016cited by 188position: lastdoi
The genome of Onchocerca volvulus, agent of river blindness
Nature Microbiology 2016cited by 146position: firstdoi
Stage-Specific Transcriptome and Proteome Analyses of the Filarial Parasite Onchocerca volvulus and Its <i>Wolbachia</i> Endosymbiont
mBio 2016cited by 70position: middledoi
Genome Sequence of the Tsetse Fly ( <i>Glossina morsitans</i> ): Vector of African Trypanosomiasis
Science 2014cited by 259position: middledoi
New approaches for unravelling reassortment pathways
BMC Evolutionary Biology 2013cited by 506position: middledoi
The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery
Genome biology 2013cited by 374position: lastdoi
Comparative Genomics of the Apicomplexan Parasites Toxoplasma gondii and Neospora caninum: Coccidia Differing in Host Range and Transmission Strategy
PLoS Pathogens 2012cited by 234position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Matthew Berriman · Wellcome Sanger Institute10 papers (2012–2022)Mandy Sanders · University of Iowa7 papers (2012–2020)Nancy Holroyd · Tufts University4 papers (2016–2022)Jean‐Claude Dujardin · University of Antwerp3 papers (2017–2020)Michael A. Miles · London School of Hygiene & Tropical Medicine3 papers (2020–2020)Alexandra Grote · New York University3 papers (2016–2020)Elodie Ghedin · National Institutes of Health3 papers (2016–2020)Susanne U. Franssen · University of Iowa3 papers (2020–2024) · 3 papers (2016–2020) · 3 papers (2017–2020) · 2 papers (2023–2024)Caroline Durrant · Centre for Human Genetics2 papers (2020–2020) · 2 papers (2023–2024)Jonas Korlach · University of Vienna2 papers (2020–2020) · 2 papers (2023–2024) · 2 papers (2023–2024)Alan Tracey · Wellcome Sanger Institute2 papers (2020–2020) · 2 papers (2017–2020)Alan Twaddle · New York University2 papers (2020–2020)Matthew B. Rogers · The University of Texas Medical Branch at Galveston2 papers (2020–2020)