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Hakan Özadam

Vedantra Pharmaceuticals (United States) · US
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Area of research
Molecular Biology · Plant Science
Research interest
Research interests include RNA and protein synthesis mechanisms, RNA modifications and cancer, Genomics and Chromatin Dynamics, and RNA Research and Splicing.
h-index
21
citations
5,129
works
50
NIH funding
primary concept
email

Recent publications

Systematic evaluation of chromosome conformation capture assays
Nature Methods 2021cited by 265position: middledoi
Systematic evaluation of chromosome conformation capture assays
The Journal of the American Medical Association (JAMA) Network (American Medical Association) 2021cited by 17position: middle
Large domains of heterochromatin direct the formation of short mitotic chromosome loops
eLife 2020cited by 21position: middledoi
A chromosome folding intermediate at the condensin-to-cohesin transition during telophase
Nature Cell Biology 2019cited by 222position: middledoi
Measuring the reproducibility and quality of Hi-C data
Genome biology 2019cited by 197position: middledoi
Transcriptional Silencers in Drosophila Serve a Dual Role as Transcriptional Enhancers in Alternate Cellular Contexts
Molecular Cell 2019cited by 148position: middledoi
Integrative detection and analysis of structural variation in cancer genomes
Nature Genetics 2018cited by 493position: middledoi
The non-canonical SMC protein SmcHD1 antagonises TAD formation and compartmentalisation on the inactive X chromosome
Nature Communications 2018cited by 124position: middledoi
Higher-Order Organization Principles of Pre-translational mRNPs
Molecular Cell 2018cited by 82position: middledoi
An Integrative Framework for Detecting Structural Variations in Cancer Genomes
bioRxiv (Cold Spring Harbor Laboratory) 2017cited by 17position: middledoi
An optimized kit-free method for making strand-specific deep sequencing libraries from RNA fragments
Nucleic Acids Research 2014cited by 66position: middledoi
ASPeak: an abundance sensitive peak detection algorithm for RIP-Seq
Bioinformatics 2013cited by 44position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Job Dekker · Howard Hughes Medical Institute8 papers (2018–2021)Liyan Yang · Guangxi University3 papers (2020–2021)Melissa J. Moore · University of Massachusetts Chan Medical School3 papers (2013–2018)Leonid A. Mirny · Centre National de la Recherche Scientifique3 papers (2018–2021)Sergey V. Venev · Howard Hughes Medical Institute3 papers (2019–2021)Ye Zhan · Institute of Wetland Research3 papers (2018–2019)René Maehr · University of Massachusetts Chan Medical School2 papers (2021–2021)Oliver J. Rando · University of Massachusetts Chan Medical School2 papers (2021–2021)Can Cenik · The University of Texas at Austin2 papers (2013–2014)Marlies E. Oomen · University of Massachusetts Chan Medical School2 papers (2021–2021)Ankita Nand · University of Massachusetts Chan Medical School2 papers (2021–2021)Johan H. Gibcus · University of Massachusetts Chan Medical School2 papers (2021–2021)Sameer Abraham · Massachusetts Institute of Technology2 papers (2021–2021)Krishna Mohan Parsi · University of Massachusetts Chan Medical School2 papers (2021–2021)Ryan M. Genga · University of Massachusetts Chan Medical School2 papers (2021–2021)Betül Akgöl Oksuz · New York University2 papers (2021–2021)Nils Krietenstein · University of Massachusetts Chan Medical School2 papers (2021–2021)Bryan R. Lajoie · Electronic BioSciences (United States)2 papers (2018–2019)Qunhua Li · Pennsylvania State University1 papers (2019–2019)Alper Küçükural · University of Massachusetts Chan Medical School1 papers (2013–2013)
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