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Kathleen M. Jagodnik

University of Miami · US
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Area of research
Molecular Biology · Obstetrics and Gynecology
Research interest
Research interests include Bioinformatics and Genomic Networks, Gene expression and cancer classification, Biomedical Text Mining and Ontologies, and Maternal and Perinatal Health Interventions.
h-index
28
citations
19,781
works
81
NIH funding
primary concept
email

Recent publications

The role of the hypothalamic-pituitary-adrenal axis in depression across the female reproductive lifecycle: current knowledge and future directions
Frontiers in Endocrinology 2023cited by 82position: middledoi
SigCom LINCS: data and metadata search engine for a million gene expression signatures
Nucleic Acids Research 2022cited by 111position: middledoi
Gene Set Knowledge Discovery with Enrichr
Current Protocols 2021cited by 3,641position: middledoi
ChEA3: transcription factor enrichment analysis by orthogonal omics integration
Nucleic Acids Research 2019cited by 1,179position: middledoi
FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources
Cell Systems 2019cited by 65position: middledoi
Massive mining of publicly available RNA-seq data from human and mouse
Nature Communications 2018cited by 737position: middledoi
The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations
Cell Systems 2017cited by 444position: middledoi
Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data
Nucleic Acids Research 2017cited by 200position: middledoi
Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
Nucleic Acids Research 2016cited by 11,555position: middledoi
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd
Nature Communications 2016cited by 298position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Alexander Lachmann · Regeneron (United States)5 papers (2016–2022)Avi Ma’ayan · Icahn School of Medicine at Mount Sinai5 papers (2016–2022)Maxim V. Kuleshov · Icahn School of Medicine at Mount Sinai3 papers (2016–2022)Megan L. Wojciechowicz · Icahn School of Medicine at Mount Sinai3 papers (2019–2022)Sherry L. Jenkins · Icahn School of Medicine at Mount Sinai3 papers (2016–2022)Zhuorui Xie · Hunan University2 papers (2021–2022)Daniel Clarke · Icahn School of Medicine at Mount Sinai2 papers (2021–2022)Zichen Wang · University of California San Diego2 papers (2016–2019)Minji Jeon · Korea University2 papers (2021–2022)John Erol Evangelista · Agostino Gemelli University Polyclinic2 papers (2021–2022)Eryk Kropiwnicki · Icahn School of Medicine at Mount Sinai2 papers (2019–2021)Alexandra Keenan · Cornell University2 papers (2018–2019)Denis Torre · Memorial Sloan Kettering Cancer Center2 papers (2018–2019)Teresa Lanza di Scalea · The University of Texas at Austin1 papers (2023–2023) · 1 papers (2022–2022)Simon Koplev · University of Eastern Finland1 papers (2016–2016)Erin McGlade · University of Utah1 papers (2023–2023)Liisa Hantsoo · Johns Hopkins Medicine1 papers (2023–2023)Mario Medvedovic · University of Cincinnati Medical Center1 papers (2022–2022) · 1 papers (2023–2023)
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