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Zichen Wang

University of California San Diego · US
Area of research
Molecular Biology · Computational Theory and Mathematics
Research interest
Research interests include Computational Drug Discovery Methods, Bioinformatics and Genomic Networks, Gene expression and cancer classification, and COVID-19 Clinical Research Studies.
h-index
45
citations
30,265
works
174
NIH funding
primary concept
email

Recent publications

Rapid iPSC inclusionopathy models shed light on formation, consequence, and molecular subtype of α-synuclein inclusions
Neuron 2024cited by 27position: middledoi
VertU: universal multilocus primer sets for eDNA metabarcoding of vertebrate diversity, evaluated by both artificial and natural cases
Frontiers in Ecology and Evolution 2023cited by 41position: firstdoi
Inpatient Administration of Alpha-1-Adrenergic Receptor Blocking Agents Reduces Mortality in Male COVID-19 Patients
Frontiers in Medicine 2022cited by 3position: middledoi
Systems Analysis Implicates WAVE2 Complex in the Pathogenesis of Developmental Left-Sided Obstructive Heart Defects
JACC Basic to Translational Science 2020cited by 28position: middledoi
ChEA3: transcription factor enrichment analysis by orthogonal omics integration
Nucleic Acids Research 2019cited by 1,179position: middledoi
Single-cell immune landscape of human atherosclerotic plaques
Nature Medicine 2019cited by 954position: middledoi
The Signaling Pathways Project, an integrated ‘omics knowledgebase for mammalian cellular signaling pathways
Scientific Data 2019cited by 130position: middledoi
Dermal Condensate Niche Fate Specification Occurs Prior to Formation and Is Placode Progenitor Dependent
Developmental Cell 2018cited by 126position: middledoi
SIRT6 haploinsufficiency induces BRAFV600E melanoma cell resistance to MAPK inhibitors via IGF signalling
Nature Communications 2018cited by 99position: middledoi
Podocyte-Specific Induction of Krüppel-Like Factor 15 Restores Differentiation Markers and Attenuates Kidney Injury in Proteinuric Kidney Disease
Journal of the American Society of Nephrology 2018cited by 53position: middledoi
The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations
Cell Systems 2017cited by 444position: middledoi
Differential cytokine contributions of perivascular haematopoietic stem cell niches
Nature Cell Biology 2017cited by 422position: middledoi
Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling
Nature Communications 2017cited by 110position: middledoi
Cell-specific prediction and application of drug-induced gene expression profiles
2017cited by 30position: middledoi
Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
Nucleic Acids Research 2016cited by 11,555position: middledoi
The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins
Database 2016cited by 1,664position: middledoi
L1000CDS2: LINCS L1000 characteristic direction signatures search engine
npj Systems Biology and Applications 2016cited by 378position: middledoi
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd
Nature Communications 2016cited by 298position: firstdoi
Polycomb repressive complex 2 (PRC2) silences genes responsible for neurodegeneration
Nature Neuroscience 2016cited by 239position: middledoi
Integrative Analysis of Sex-Specific microRNA Networks Following Stress in Mouse Nucleus Accumbens
Frontiers in Molecular Neuroscience 2016cited by 36position: middledoi
Abstract SY10-04: Histone tail alterations in cellular senescence
Cancer Research 2015cited by 0position: middledoi
Dynamic Phosphorylation of CENP-A at Ser68 Orchestrates Its Cell-Cycle-Dependent Deposition at Centromeres
Developmental Cell 2014cited by 108position: middledoi
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool
BMC Bioinformatics 2013cited by 8,319position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Avi Ma’ayan · Icahn School of Medicine at Mount Sinai16 papers (2013–2019)Nicolas Fernandez · Universidad de Los Andes5 papers (2016–2019)Qiaonan Duan · Hua Medicine (China)5 papers (2013–2017)Andrew D. Rouillard · Icahn School of Medicine at Mount Sinai3 papers (2016–2016)Alexander Lachmann · Regeneron (United States)3 papers (2016–2019)Neil R. Clark · NIHR Birmingham Liver Biomedical Research Unit3 papers (2013–2017) · 2 papers (2015–2018)Michael G. McDermott · Illumina (United States)2 papers (2016–2016)Caroline D. Monteiro · Illumina (United States)2 papers (2016–2016)Gregory W. Gundersen · Princeton University2 papers (2016–2016)Marc Hafner · Gene Therapy Laboratory2 papers (2016–2017)Kathleen M. Jagodnik · University of Miami2 papers (2016–2019)Mario Niepel · Ribon Therapeutics (United States)2 papers (2016–2017)Rachel Hodos · Courant Institute of Mathematical Sciences2 papers (2016–2017)Joel T. Dudley · Hamilton Thorne (United States)2 papers (2016–2017)Emily Bernstein · Icahn School of Medicine at Mount Sinai2 papers (2015–2018)Peter K. Sorger · University of Massachusetts Boston2 papers (2016–2017)Yan Kou · Dalian Institute of Chemical Physics1 papers (2013–2013)Edward Chen · University of Alabama at Birmingham1 papers (2018–2018) · 1 papers (2014–2014)