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Thomas Kirchner

Martin Luther University Halle-Wittenberg · DE
Area of research
Radiology, Nuclear Medicine and Imaging · Biomedical Engineering
Research interest
Research interests include Photoacoustic and Ultrasonic Imaging, Optical Imaging and Spectroscopy Techniques, Advanced MRI Techniques and Applications, and Thermography and Photoacoustic Techniques.
h-index
15
citations
986
works
94
NIH funding
primary concept
email

Recent publications

Depth-Specific Hypoxic Responses to Spreading Depolarizations in Gyrencephalic Swine Cortex Unveiled by Photoacoustic Imaging
Translational Stroke Research 2024cited by 1position: middledoi
Learned spectral decoloring enables photoacoustic oximetry
Scientific Reports 2021cited by 70position: middledoi
Systematic multi-omics cell line profiling uncovers principles of Ewing sarcoma fusion oncogene-mediated gene regulation
bioRxiv (Cold Spring Harbor Laboratory) 2021cited by 10position: middledoi
Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging
Informatik aktuell 2021cited by 3position: middledoi
Light source calibration for multispectral imaging in surgery
International Journal of Computer Assisted Radiology and Surgery 2020cited by 8position: middledoi
Context encoding enables machine learning-based quantitative photoacoustics (Erratum)
Journal of Biomedical Optics 2020cited by 0position: firstdoi
Deep learning-based oxygenation estimation for multispectral photoacoustic imaging (Conference Presentation)
2020cited by 0position: middledoi
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks
International Journal of Computer Assisted Radiology and Surgery 2019cited by 29position: middledoi
Estimation of blood oxygenation with learned spectral decoloring for quantitative photoacoustic imaging (LSD-qPAI)
arXiv (Cornell University) 2019cited by 21position: middledoi
Photoacoustic monitoring of blood oxygenation during neurosurgical interventions
Photons Plus Ultrasound: Imaging and Sensing 2019 2019cited by 7position: firstdoi
An open-source software platform for translational photoacoustic research and its application to motion-corrected blood oxygenation estimation
arXiv (Cornell University) 2019cited by 5position: firstdoi
International Photoacoustic Standardisation Consortium (IPASC): overview (Conference Presentation)
Photons Plus Ultrasound: Imaging and Sensing 2019 2019cited by 4position: middledoi
Photoacoustics can image spreading depolarization deep in gyrencephalic brain
Scientific Reports 2019cited by 0position: firstdoi
Reconstruction of initial pressure from limited view photoacoustic images using deep learning
Photons Plus Ultrasound: Imaging and Sensing 2018 2018cited by 95position: middledoi
Context encoding enables machine learning-based quantitative photoacoustics
Journal of Biomedical Optics 2018cited by 60position: firstdoi
Signed Real-Time Delay Multiply and Sum Beamforming for Multispectral Photoacoustic Imaging
Journal of Imaging 2018cited by 45position: firstdoi
Confidence Estimation for Machine Learning-Based Quantitative Photoacoustics
Journal of Imaging 2018cited by 34position: middledoi
Confidence estimation for quantitative photoacoustic imaging
Photons Plus Ultrasound: Imaging and Sensing 2018 2018cited by 1position: middledoi
Real-time delay multiply and sum beamforming for multispectral photoacoustics (Conference Presentation)
Photons Plus Ultrasound: Imaging and Sensing 2018 2018cited by 1position: middledoi
Real-time in vivo blood oxygenation measurements with an open-source software platform for translational photoacoustic research (Conference Presentation)
Photons Plus Ultrasound: Imaging and Sensing 2018 2018cited by 0position: firstdoi
MITK-OpenIGTLink for combining open-source toolkits in real-time computer-assisted interventions
International Journal of Computer Assisted Radiology and Surgery 2016cited by 15position: middledoi
Freehand photoacoustic tomography for 3D angiography using local gradient information
Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE 2016cited by 7position: firstdoi

Grants

No grants ingested yet.

Frequent collaborators

Lena Maier Hein · German Cancer Research Center20 papers (2016–2024)Janek Gröhl · RWTH Aachen University17 papers (2016–2021)Tim Adler · German Cancer Research Center8 papers (2018–2021)Franz R. Sattler · Bielefeld University4 papers (2018–2019)Edgar Santos · Carl von Ossietzky Universität Oldenburg4 papers (2019–2024)Adrián Hernández-Aguilera · University Hospital Heidelberg4 papers (2019–2024)Marco Nolden · Technische Hochschule Mannheim3 papers (2016–2019)Niklas Holzwarth · German Cancer Research Center3 papers (2019–2024)Mildred A. Herrera · University Hospital Heidelberg3 papers (2019–2021)Anant Vemuri · German Cancer Research Center2 papers (2019–2020)Angelika Laha · DKFZ-ZMBH Alliance2 papers (2018–2019) · 2 papers (2019–2021)Moritz S. Bischoff · University Hospital Heidelberg2 papers (2018–2019) · 2 papers (2019–2021)Leonardo Ayala · German Cancer Research Center2 papers (2019–2020)Klaus Maier‐Hein · German Cancer Research Center2 papers (2016–2018)Carsten Rother · Heidelberg University2 papers (2019–2021)Sebastian Wirkert · Heidelberg University2 papers (2019–2020)Doğu Teber · Städtisches Klinikum Karlsruhe1 papers (2020–2020)Melissa Gymrek · University of California San Diego1 papers (2021–2021)